barSeed - Barley Seed Development Database

Probe ABC12944

Source Contig ABC12944

barSeed

Links

Affymetrix Source Sequence (785 bp)

>ABC12944 785
TAGTGAGCCTGCAAAGCGCGAACACGTACGACGTGTGCGCAGGCAGCTTCTTCCGGTCTA
CCAAGAAAATAGAATGGTTCGTGGCGTCCATTGCGGTGGTGCATGCGCCGTCCTCCTGGC
CATCGCCGTCGCGCTCGGCCTCGGCGTCCGCGGCGGCGCGGCGCAGCTGCACGACAAGTT
CTACGACGGGTCGTGCCCCGGCGTGCACGGGGTCGTTCGGCGGGTGCTGAGGGAGGCGCA
CAAGGCCGATAAGCGCATCTACGCCAGCCTCACGCGCCTCCACTTCCACGACTGCTTCGT
GCAGGGATGCGACGGGTCGATTCTGCTGGACAACAGCACGAGCATCGTGTCGGAGAAGTA
CGCCAAGCCGAACAACAACTCGGTGCGCGGGTTCACGGTGGTCGACGACGTGAAGGCGGC
GCTCGAGAAGGCCTGCCCCGGCGTCGTCTCCTGCGCCGACATACTCGCCATCGCCGCCAA
GGTCTCCGTCGAACTGGTACGTGCATGCCGCATGCGAGTGCTTATCTGCCGGCGATGTAC
GTGTAGCATGCATGCGTTCTTTTCACTGCTCACATTCACCGGCTTCATCACTGAGAAAAA
ACAACATCGTTGTTCACAGACCAGGCGCTGCTGCCAATGTGGCAATGTACTGGCAAGCTA
CTGGCTAAAAGGTGCAGTAGGTATAGCCTAGCTCATATATGCCCGAGCTGAGCTTGCGGC
AATAATTCAGAAACCGTCGGTGCAAAATAATTGAGCTGCATGCAAACGAAAAAAAAAAAA
AAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_62332.4	1043	0.0	24 - 792	100	769 / 769	CUST_17381_PI390587928 CUST_28047_PI390587928	ABC01865 ABC12944
MLOC_62332.5	1206	0.0	19 - 514	100	496 / 496	None	ABC01865 ABC01867 ABC12944
MLOC_62332.3	1266	0.0	45 - 540	100	496 / 496	CUST_33642_PI390587928	ABC01865 ABC01867 ABC12944
MLOC_62332.2	1271	0.0	45 - 545	99	498 / 501	CUST_33642_PI390587928	ABC01865 ABC12944
MLOC_62332.1	1269	0.0	45 - 543	99	496 / 499	CUST_33642_PI390587928	ABC01865 ABC01867 ABC12944
MLOC_60157.2	2016	5e-56	494 - 774	81	229 / 283	CUST_34674_PI390587928	ABC01865 ABC01867 ABC12944
MLOC_60157.1	1007	1e-52	455 - 729	81	223 / 277	None	ABC01865 ABC01867 ABC12944
MLOC_60157.3	1452	1e-52	492 - 766	81	223 / 277	None	ABC01865 ABC01867 ABC12944
MLOC_20914.2	1529	4e-52	881 - 1151	81	220 / 273	None	ABC01865 ABC01867 ABC12944