barSeed - Barley Seed Development Database

Probe ABC12905

Source Contig ABC12905

barSeed

Links

Affymetrix Source Sequence (875 bp)

>ABC12905 875
TCCAGGTTTCCAGAATGTGGTCCATCTGGGTTAATCGTTGTGATGGTAGCTTTCAACGAT
GGTTTAGTCCGGTCGATCTTATGAATGTATGAGGGCAAAAAATTCCGCTTCCAGTGTAAA
CAAGAAATTATACATAGTTGATGCCCAGCCAAGAGCAAATGGGGCAATGGGTGGTGGCTG
AGAGTCATCTTCTAATTATGCAAAATCCGAGGAATACAAAACATCCACACAATGAGAGAT
AGTGTTTCTCGCCTTAGGGATTATGTGGATGCCCATGGGTCAATATCATCAAATGGTTCC
TCTTTAGCTCTATCCCTTGTCGGAGACTGGGCAAGCATTTGATTTTTTTTCACACTTTAA
TGTATGCATGTTCACCGAGAAGCAAACAAAAGAATAATACCAATATTTTCTCTTTCAGAT
AAATAGGGGATCAACCTGGGGTGGAGGTAGTCTTAATAGCATGATAATTTTCTTCGATGT
TAGGGGGTGGCTAAATCATATCCAAAACACCTGATTGGTGCTTCATGGATTGTTGTACAA
ATTGCCCAGGAATACATTATTACTAAAACAAGTAAGAATGGCCTCATGTTGCCTTTGAAT
CTGATTGGCATATATTAGTGGAGATATGGAACTCAAGAAAACATAACAGATTGGAGATTA
TGGGCCTCCTGTCAGAAATTGAGTCCAGCCAAGCCTTTTGTTCTTCTGTTGTGTATTTTC
TTCTTAGAGAGGTTAGTTTTGTATGCACACTTGTGTAAAAAGCTGCCCCTAAAGGTTAGT
GACCGGAGGCTATGTCGTAAATTTTAATGCAAGTGACCGGAGACCCTTTGATTGTAAAAA
GAGGCTCCTTAAAAATTGTTTGGTGTTACGATTTT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK373317	3230	0.0	2300 - 3176	99	874 / 877	CUST_8320_PI390587928 CUST_8199_PI390587928	ABC11577 ABC12905 ABC39250
MLOC_47551.2	614	0.0	184 - 614	100	431 / 431	None	ABC12905
MLOC_49423.1	418	0.0	1 - 418	99	417 / 418	None	ABC12905
MLOC_47551.1	523	2e-164	188 - 501	100	314 / 314	None	ABC12905
MLOC_47552.1	722	9e-99	184 - 379	100	196 / 196	None	ABC12905
MLOC_42606.1	292	9e-94	48 - 243	98	193 / 196	None	ABC12905
MLOC_30214.1	342	9e-89	15 - 210	97	190 / 196	None	ABC12905