barSeed - Barley Seed Development Database

Probe ABC12677

Source Contig ABC12677

barSeed

Links

Affymetrix Source Sequence (977 bp)

>ABC12677 977
GGAAGCGTCCCGCCGCCGCCTCGGGGGATTCGCCGGCCAGCGGCGAGAGCGAAGCGAGGC
AGCGGCGCCATGGCGCGCCCCTCGCGGCTCTACCTCCTCGCCTACAACTCCCTCCAGGCC
ATCGGATGGTCCGTCGCCTTTCTCCGCCTCCTGGCCTGCCTAGCCCCTCCCGTCTCCGTC
GACTCCGCATACGCCGCCGCCGGCGACCTCATATGCCTTCTGCAAACCTGCGCGGTCCTT
GAGACCATCCATGCCGCCGTCGGATTGGTGCCCACCTCGCCGTTTCTTGCCTTCTTGCAA
TGGGGAGGGAGGACTCACTTCGTTCTTGCCCTTCTCCGGCAAATCCCTGAGGTTCAGGAC
AGCCCATCTGTGTTCATAACGTTTATGGCTTGGAGCATATCTGAGGTTATTCGATACTCT
CACTATGCTCTGAGTACCATAAAAGTTTGTCCAGCATGGCTGACTTACCTCAGGTACACT
GCTTTTATCCCGTTGTATCCTATCGGGGTAGGACCAGGGGAAATGTGGACTATGTACCAA
GCTCTTCCATTTGTAAAGGAGAGGGACCTCTACTCAGGCTTCTTTGCAAAGTTCTCCATG
AGCTACCATTCATTTCTTGTGGGTGTGCTGCTGTGCTATCCGCTTCTATGGCTGAAGCTG
TACCTGCATGTGTTCAAGCAGCGCAAGTCCAAGCTGGGAAAGGCGGACAGGAAGAAACGG
GCATGAGGCAACCAGATTGTTGGGAGGGTCTTGCAGCTGTGGAGTCTTAGCTGAGTTGAG
AGGCAACTTACTATACTACTAGCAGATTACTGATCTCTATCGGATTTACTGAATTTGAAT
GAAGATGCCAAATTTGTTGTAACATATGCATTTTACAAAAATTGAGCAAAGTATGCCAAA
TTTGTAAATGTATGGGGAAAAAAACTTGACCATTTTTATACCTAAAAAGCAAAATCAAAC
AAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_62418.3	2167	0.0	1095 - 2056	100	962 / 962	CUST_12634_PI390587928	ABC11742 ABC12677 ABC13724
MLOC_62418.5	1682	0.0	788 - 1563	100	776 / 776	None	ABC11742 ABC12677 ABC13724
MLOC_62418.9	2664	0.0	2108 - 2514	100	407 / 407	CUST_12634_PI390587928	ABC11742 ABC12677 ABC13724
MLOC_62418.6	1668	0.0	1068 - 1626	100	559 / 559	CUST_12634_PI390587928	ABC11742 ABC12677 ABC13724
MLOC_62418.7	2227	0.0	1068 - 1506	100	439 / 439	CUST_12634_PI390587928	ABC11742 ABC12677 ABC13724
MLOC_62418.4	1790	2e-130	788 - 1040	100	253 / 253	None	ABC11742 ABC12677 ABC13724
MLOC_62418.8	1671	6e-136	1304 - 1572	99	268 / 270	None	ABC11742 ABC12677 ABC13724
MLOC_62418.1	1990	0.0	1095 - 1592	99	496 / 498	CUST_12634_PI390587928	ABC11742 ABC12677 ABC13724
MLOC_62418.10	674	0.0	149 - 623	100	475 / 475	None	ABC12677
MLOC_62418.2	1770	2e-56	1640 - 1759	100	120 / 120	CUST_12634_PI390587928	ABC11742 ABC12677 ABC13724