barSeed - Barley Seed Development Database

Probe ABC11831

Source Contig ABC11831

barSeed

Links

Affymetrix Source Sequence (1064 bp)

>ABC11831 1064
GCCGTCTCCTCGCCCTCGAACGGGGTCCGCAGGGACAGCGCCTTCCTGGCCTGCTCGAAG
GGGTCGACGCCGCCGACGGCCGGGCCCTCTGGCGAGCCCTCGACGCCGGCCATGCCCCGG
GCTTGACTGCCCTTGTTGTGAAACCACGGAAAGAATTGAACATGTTTTGAGATCCATTCA
ATCAATTTGCTGGTTCCTTGAGTACACCCTGCTTTGGAGGGATCTTTAGTCCATGAGTTA
TTACCTTCATTTGGACAGTTTATCAGTAAATAAGTTTCTATAGTTAACATTTAATCCCCT
TGTTCACATAGCAGCTGGAGATCTCGACAGCATCAGAGAAGCTCATTGAGTGTCAAGAGA
CAATCCTAAGCCTGGGAAAGAAACTAAAAGCACTTGCATCGCCAAAGGATGCCACCTCGG
TCCGTCCAGAGCGAAAACCTCGGTCTCATTCACTGAATGAGATGCTAGACGTCGATGACG
GGGGATTTGATGACCTCAGCTCCCCGAAGACCAAGGAGATTATATGCTCAGAAATAAGGC
CACCACATGAAAGAAGATTTTCTTCCGACGAGGGAGGTGACAATTCAGTATCGTATTATT
CTCACCAACACCAGTGGTTCCACCCGCCAAACCTTATGATGTGAGAGGAAGCTGCAAGAA
AAAGAAGCTGCTGCCAAGGCCGTATCACTGGCCGTTGTCCCAAGCAAGCAGAAGGGGAAC
CCCAACTTGCTCAAGAGGATCCTGACAGGAAGGAGAAGGGATGCCATAATAAAACCAAAG
GTGGTCCTGAGTGCTTAGCCTAACAGAGACAAGGGTAACTCTATCCATGATAAATTCCAT
TTCCATGTGTAAATTAAGCGTGTATCGGTTGCTTGTTGAGGGTGTTTTTGTCAGGTTTAG
GAAGACCCATGTGTAACGGTTGCTTGTTGAGGTGTGTTTTTGTCAGGTTTAGGAAGAACC
ATGTGTAATGGTTGCTTGTTAAGGTGTGTTTTTGTCAGGTTTAGGAAGAACCATGTGTAA
CGGTTGCTTGTTGAGGTGAAATTTTGTCAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_43096.1	289	4e-128	1 - 289	96	276 / 289	None	ABC11831
MLOC_70044.1	3087	3e-124	1 - 281	95	268 / 281	CUST_35389_PI390587928 CUST_27648_PI390587928 CUST_19679_PI390587928 CUST_35060_PI390587928	ABC11831
MLOC_70044.2	3160	3e-124	1 - 281	95	268 / 281	CUST_35389_PI390587928 CUST_27648_PI390587928 CUST_19679_PI390587928 CUST_35060_PI390587928	ABC11831
MLOC_70044.3	3084	1e-122	1 - 278	95	265 / 278	CUST_27648_PI390587928 CUST_19679_PI390587928 CUST_35060_PI390587928	ABC11831
MLOC_70044.4	2630	1e-122	1 - 278	95	265 / 278	CUST_35389_PI390587928 CUST_27648_PI390587928 CUST_19679_PI390587928 CUST_35060_PI390587928	ABC11831
MLOC_70044.5	2653	6e-121	1 - 275	95	262 / 275	CUST_27648_PI390587928 CUST_19679_PI390587928 CUST_35060_PI390587928	ABC11831
MLOC_70044.6	3028	1e-118	4 - 271	96	256 / 268	CUST_27648_PI390587928 CUST_19679_PI390587928 CUST_35060_PI390587928	ABC11831
MLOC_48089.1	315	3e-114	65 - 315	96	243 / 252	None	ABC11831
MLOC_41134.1	376	7e-66	1 - 149	97	145 / 149	None	ABC11831
MLOC_31498.1	154	2e-61	1 - 154	95	146 / 154	None	ABC11831