barSeed - Barley Seed Development Database

Probe ABC11344

Source Contig ABC11344

barSeed

Links

Affymetrix Source Sequence (996 bp)

>ABC11344 996
GGCCAAGGACAAAAGGAATGCTGTAGACAGTGAGAAGGTAAACGATGAAGATAAGGAGAT
GAAGCTAGCTTCCTCAGCTGACACTGGTGCAGCCAAACAGAAGAAAAAGAAAAGCAAGAA
GCAAAGTGCTTCTGAAGGTGACACTGATGAGCAAGCTGATAAGAAAACCATAACTGACAA
TGATGAGGAGCCTAGCAAAGAGGGGGCCAAGAAAAAGAAGAACAAGAAGAAAACACAGGA
GAACAACAGAAGTGAGAACCAGGCACAGGCTGATGTTATGAATTCAGCTAGCAAGGAGCA
GACATCTCCAAAAGCACGTACTTATGGCAATGGTTTGATTGTTCAGACGGTGGCGTTGGG
TAAACCAGATGGTAAAAAAGCTACCCCTGGGAGAAAGGTTTTTGTCACGTACACTGGCAA
GTTGAAGAATGGCAAGATTTTTGACTCTAATGTTGGTCGGAAGCCTTTTCAGTTTAGGCT
AGGTGTTGGAGAGGTCATTAAAGGCTGGGACATTGGTGTCAACGGTATGCGTGTTGGGGA
CAAAAGAAAGCTTACCATTCCACCTTCTATGGGCTATGGAAACCAGAAGGCCGGAACGAT
ACCGCCGAACTCAACTCTTCTGTTTGATGTGGAGCTAATGAACGTACAGTGAAGAGATGG
TCCAAAAGGGATGAGTACAGTGAAGAGATGGTTCAAAAGGGATGAGTACAAACCGAGACG
GTTGTGCAAGTTCAAGAAAACATCATTTTCCTCCGTTCTCGCCATAGCTTCAGTCAACAT
CCTACAGTCGTCTTTATGTACCTTGTTTTTTCATCAGTTCTTCATGTTAATTAAGCCATC
TGGGCTAGTTTTGGAAGCGTAACATTGGCCTGGGTTGCAACTGAGCTTACTACTGTGATG
ATTTTGTGACTCGTTTTGACAATCTTTTGGAATCACGCTAAGACTTGTTATGAAGAAATG
GATGTCACCGTTTTGAACTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_70500.1	2348	0.0	1 - 884	99	883 / 884	CUST_18741_PI390587928 CUST_9425_PI390587928	ABC06102 ABC11344 ABC11345
MLOC_70500.2	1791	1e-83	1 - 169	100	169 / 169	CUST_18741_PI390587928 CUST_9425_PI390587928	ABC06102 ABC11344 ABC11345
MLOC_70500.3	1507	0.0	106 - 504	99	398 / 399	CUST_18741_PI390587928 CUST_9425_PI390587928	ABC06102 ABC11344 ABC11345