- Probe ABC11338
- Source Contig ABC11338
Affymetrix Source Sequence (1246 bp)
>ABC11338 1246 AGTTGACTCAGGTAGAGGAGGAGGAGGAGGAGGAGGAGGATGGAACCGCCGCGACACGTG TGCGTGACCGGCGGCGGCGGGTTCATCGCCTCGTGGCTCGTCAAGCTGCTCCTCTCCCGG GGCTACGCCGTCCACGCCACCGTCCGCGACCCCAGTGACCAGAAGAACGCGCATCTGATG CAGCTGGACGGGGCGGCGGAGAACCTGCGTCTGTTCAAGGCCGACGTGCTCGACAGCGCC GCGCTGGCCGCCGCCGTCGAGGGGTGCGAGGGCGTCTTCCATGTCGCCTCCCCCGTCCCT GCGGATAAGATCCTCGATCCTGAGTCAGAAGTCATGGTGCCTGCCGTGAAGGGAACCTTA AATACTCTTGAAGTTTGCTCATCTCTGAAGGTTCAGAAGGTTGTGGTGGTGTCATCCACT GCTGCTGTTCGTTATAACCCCAACTGGCCTCTGGGTAAACCCAAAGACGAGAGTTGCTGG TCGGACAGAAAAGTATGCAAGGACAATGAGATCTGGTATTGTCTTGCTAAAACTGTTGCT GAACAGACAGTTTGGGAATATGCAGAGAAGAACGAGCTAAATGCTGTTACAGTATGCCCT TGTATTGTTTTGGGGCCACAATTGCAACGTGTTGTCAATACTACAAGCGAACTCCTCCTC TATGTCATAAAAGGAGGTCCTAATGTGTTGAATGACATGCTGTGGCACATAGTCGATGTC CGTGATGTGGCCGATGCCCTGCTTCTAGTATACGAGAAACCAGAATCATCCGGAAGATAT ATCTGCGCACCAAATTATATTAGCACAAACGCTATGTTGGAGTTGCTAAAGAAGACGTAC CCTGACTACAACTATGTAAAGTGCAAGGCTGATGTGCATCAGAACTCTCCTACCACGCTG ATCACGTCAGGAAAATTGAATGATCTGGGCTGGAAGCCGAGGGCATTGGAGGAGACGCTA CTGGACAGCATCGATTATTACCGGAAGACAGGAATTCTGCAGGATGGGGAGGGACAGACC TACCGCCTCCCTGATATTTTCCGTCGTTTTCAAGCTGCCGAGGAATGAGTCAAGAGCGGC AGTGGCCAGTGCTTTCTAGTTATGTCATTGTGCTTGTAACTGCGGAACATGCATTGGAGT TCCCAGGTACCACACGCCCCTATATGAATATAGCATAAAAAAAAACCAGGAAATGTAAAA AAATTCTAAAACTTTGGATATCATATCTGGGTGCCAATTGTACACC
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| AK370330 | 1293 | 0.0 | 35 - 1281 | 99 | 1246 / 1247 | CUST_12641_PI390587928 | ABC02384 ABC08979 ABC11338 ABC24449 |
| MLOC_73322.3 | 1334 | 0.0 | 368 - 1291 | 100 | 924 / 924 | CUST_12641_PI390587928 | ABC11338 ABC24449 |
| MLOC_73322.4 | 1115 | 0.0 | 119 - 1040 | 100 | 922 / 922 | CUST_12641_PI390587928 | ABC11338 ABC24449 |
| MLOC_60115.1 | 1445 | 0.0 | 233 - 1291 | 89 | 947 / 1059 | CUST_12640_PI390587928 CUST_4409_PI390587928 | ABC08979 ABC11338 ABC24449 |
| AK360878 | 1316 | 0.0 | 1 - 1043 | 88 | 920 / 1047 | None | ABC02384 ABC08979 ABC11338 |
| MLOC_73322.2 | 2280 | 0.0 | 368 - 719 | 100 | 352 / 352 | CUST_12641_PI390587928 | ABC11338 ABC24449 |
| AK372877 | 1296 | 0.0 | 42 - 1026 | 85 | 843 / 988 | None | ABC02384 ABC08979 ABC11338 |
| MLOC_73322.1 | 2515 | 6e-82 | 869 - 1034 | 100 | 166 / 166 | CUST_12641_PI390587928 | ABC11338 ABC24449 |
| MLOC_44441.1 | 1301 | 0.0 | 242 - 993 | 85 | 638 / 754 | None | ABC11338 |
| MLOC_60115.2 | 667 | 0.0 | 51 - 503 | 92 | 417 / 453 | None | ABC08979 ABC11338 |
| MLOC_41789.1 | 271 | 6e-132 | 16 - 271 | 100 | 256 / 256 | None | ABC02384 ABC08979 ABC11338 |
| AK356922 | 1406 | 2e-127 | 103 - 932 | 77 | 639 / 833 | None | ABC02384 ABC08979 ABC11338 ABC43764 |
| MLOC_16449.1 | 384 | 2e-101 | 130 - 384 | 93 | 238 / 256 | None | ABC02384 ABC08979 ABC11338 |
| AK370761 | 1334 | 2e-76 | 92 - 771 | 75 | 516 / 690 | None | ABC02384 ABC08979 ABC11338 |
| MLOC_61924.1 | 1482 | 8e-71 | 614 - 1307 | 74 | 517 / 699 | CUST_429_PI415269222 CUST_16945_PI390587928 | ABC02384 ABC08979 ABC11338 |
| MLOC_69024.1 | 525 | 2e-61 | 40 - 270 | 86 | 202 / 236 | None | ABC02384 ABC08979 ABC11338 |