barSeed - Barley Seed Development Database

Probe ABC11229

Source Contig ABC11229

barSeed

Links

Affymetrix Source Sequence (1286 bp)

>ABC11229 1286
CTCACCGCCGCGGCGAACCAACGACGTCTCGCCTCCTCCCACTCCGGCCGCCGTGCGCGC
CATAGGCACAGCAGCCGACACCTAGATCGTGAAATCGGGATGGGTCGCGGTAAGGTGCAG
CTGAAGCGGATAGAGAACAAGATAAATCGGCAGGTGACCTTCTCCAAGCGCCGCAACGGG
CTCCTGAAGAAGGCGCACGAGATCTCCGTCCTCTGTGACGCAGAGGTCGCCGTCATCGTC
TTCTCCCCCAAAGGCAAGCTCTATGAGTACGCCACCGACTCCAGCATGGACAAAATTCTT
GAACGTTATGAGCGCTACTCTTATGCTGAAAAGGCTCTTATTTCAGCTGAATCTGAAAGT
GAGGGGAATTGGTGTCATGAATACAGGAAACTTAAGGCGAAGATTGAGACCATACAGAAG
TGTCACAAGCACCTCATGGGAGAGGATCTGGATTCTCTGAACCTCAAAGAACTCCAACAA
CTGGAGCAGCAGCTGGAGAGTTCATTGAAGCACATCAGATCGAGAAAGAGCCATCTTATG
ATGGAGTCCATTTCTGAGCTACAGAAGAAGGAGAGGTCACTGCAGGAGGAGAACAAGGCC
CTACAGAAGGAACTGGTGGAGAGGCAGAAGGCGGCCAGCAGGCAGCAGCAGCTGCAGCAG
CAGCAACAACAACAACAAATGCAATGGGAGCACCAAGCCCAGACCCAAACCCATACCCAT
ACTCAAAACCAGCCCCAAGCCCAGACTAGCTCATCATCTTCCTCTTTCATGATGAGGGAT
CAGCAGGCCCATGCCCCTCAACAGAACATTTGTAGCTACCCACCGGTGACGATGGGTGGG
GAGGCGACGGCGGCGGCGGCGGCGCCGGAGCAGCAGGCTCAGCTTCGCATATGCCTACCG
CCATGGATGCTGAGCCACCTCAACGCTTGAGGAAGGAAGAGGTTTAATTGCCAAAGCAGC
TGAAACAGCATTAATCGGCACACTAGCAATTAAGCTGCTATGGTTATGTTTGCTTGCCCC
TACCCTTATATATATGATTTGCAAGAAAAAAAATGAGCAGAGAGATCAGGAATGCTGGTT
CGCTGTATAATTTTGTTGCATGTTCAGCAACACGTACCAATTGATGCAAACATGCATGCT
TAGCAACCAACCAATTACCTTAGCATGGATGACTTGCTTGGCTTAATTATGGAAAGCTAG
GTTGCATGATGACGTGTGTATATATATGATATATTTTTATATTTTATCTGAAATCTAAAT
GGGTGAATGAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_61901.1	1534	0.0	257 - 1527	99	1270 / 1271	CUST_16581_PI390587928	ABC11229
MLOC_61901.3	1092	2e-121	856 - 1092	100	237 / 237	None	ABC11229
MLOC_61901.2	1321	0.0	228 - 656	99	428 / 429	None	ABC11229
AK360697	1193	3e-154	142 - 694	85	470 / 556	CUST_41105_PI390587928	ABC07416 ABC11229 ABC49647