barSeed - Barley Seed Development Database

Probe ABC11172

Source Contig ABC11172

barSeed

Links

Affymetrix Source Sequence (883 bp)

>ABC11172 883
GGCTCTCCGCCCTCTCCCCAGTCGCCCCGCCGCCGCGGCCTCCTTGCTGCCTGCGTCCGC
TTTCGTCCTCCGTCTCCTCCTCGTCTTCCCCGCTCCGAGGATGGAGGAGCCGCCGCGGTA
CAAGTTCGGGCCGTATAAGATCGACGCGAGGGAGGTCTTCCACGCCACGCCCCTCTCGTA
CGCCATGGTCAACCTCCGCCCCCTCCTCCCTGGTCATGTCCTTGTGTGCCCCAAGCGCGA
GGTGAAACGATTTGCTGATCTAAGTTCTGATGAGACTGGTGATTTGTGGGTAATTGCAAA
GGAAGTTGGTGCAAAGCTCGAGCAGTACCACAAAGCTTCCTCCATCACATTCGCGATTCA
GGATGGTCCTCAGGCTGGCCAAACAGTTGCCCATGTACACATCCACGTCATCCCCAGGAA
GAAAGGAGATTTTGAGAAGAACGATGAAATATATGATGCGATTGAGGTGAAAGAGAAGGA
AATGAAGGAGAAGCTTGACCTAGACGTCGAAAGAAAAGATAGAAGCATGGAAGAAATGGC
TCATGAGGCCACCGAGTACCGCGCTCTTTTCTTCTAGCCAGACAAATGTATCTCTGATGA
ACTCTCTAATTTTCTGCCACTCTTGCCTAAAACTAGCCTTACGATTGTTTGTCCTTGATT
GCGCGGTGTGGTTCGTATTGTCCACGGACCTGGCAGCACCAGTCCAAATCTGATGTAGTG
ATATTGCAAGACCGCTTGTTCATCGCGCTGGTTATTCTTCGTTGCGTGACTACCGAACTT
ATTTTCTTGTTCCCCACTGATCTTCCTTTTGGAAAGGGGAGGAAAGGAAAAGATTTGAGC
TTATTGGCATTTGGTTGATGGAGATGTGGTGCATATGTTCTGC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK368925	851	0.0	13 - 851	100	839 / 839	None	ABC11172 ABC16874 ABC48971
AK354964	819	0.0	62 - 819	100	758 / 758	None	ABC11172 ABC16874 ABC48971
MLOC_10145.1	2151	0.0	373 - 1041	100	669 / 669	CUST_39535_PI390587928 CUST_12861_PI390587928	ABC11172 ABC20034 ABC48971
MLOC_10146.1	2404	4e-72	353 - 500	100	148 / 148	CUST_12861_PI390587928 CUST_39535_PI390587928	ABC11172 ABC20034 ABC48971
MLOC_66367.4	732	1e-146	117 - 621	85	434 / 508	None	ABC11172 ABC16874 ABC48971
MLOC_22250.2	1335	1e-111	572 - 793	99	221 / 222	CUST_20605_PI390587928	ABC11172
MLOC_22250.1	2272	3e-108	1518 - 1730	100	213 / 213	CUST_20605_PI390587928	ABC11172