barSeed - Barley Seed Development Database

Probe ABC16874

Source Contig ABC16874

barSeed

Links

Affymetrix Source Sequence (813 bp)

>ABC16874 813
GCTCTGCTCCGCCCTGCGCTCGCGTGCCCTCCTCCTCCCCCTGACCCCGCCGCCTCGTAC
GCGTACGGCCACCCTTCGCCGCCACACTTGGCCGCGGGCCACCTCCTCCTTGTCATCTCC
GCCGCCGCCGGAGATGGAGGCCTCGACGTACAAGTTCGGGCCCTACAGGATCGACGCGAG
GGAGGTCTTCCACGCCACGCCCCTCTCCTACGCCATGGTCAACCTACGCCCCCTCCTCCC
TGGTCATGTCCTTGTGTGCCCCAAGCGTGAAGTGAAACGCTTTACTGATCTAAGCACTGG
CGAGACAAGTGATTTATGGGTCACTGCAAAGGAAGTTGGTGTACGGCTTGAGCAGTACCA
CAAAGCTTCTTCGCTTACATTTGCAATTCAGGATGGTCCTCAAGCTGGCCAAACAGTTCC
GCATGTCCACATCCATGTGATCCCCAGGAGGAAGGGAGATTTTGAAAATAATGATGAAAT
ATATGACGCGATTGATGTGAAAGAAAAAGAATTGAAGGAAAAGCTCGATCTGGATGTTCA
AAGAAAAGATAGGACCATGGAAGAAATGAGTCATGAAGCTAACGAGTACCGTGCTCTTTT
CTCCTAGATGTATTTCTTACAAACTGTTTTCTAATTTTTCACTCAGTGTTTTCACTGAAA
TAGACTTCTGGACTGTTTGTTCTGCATTGTTTTTCGAGAGTGTAGCAATGGATATTTTAT
TTTCCACTGACCTGGTGATGTCGAGTCTTAACTGATGAGTCTGAGGTAGTGGGTTACTTA
TGTAGTACTTATGTGATAATAGTTGTTCCTCTC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_66367.4	732	0.0	15 - 732	100	718 / 718	None	ABC11172 ABC16874 ABC48971
MLOC_66367.1	1602	8e-129	68 - 323	99	255 / 257	CUST_27890_PI390587928	ABC16874
MLOC_66367.3	1985	2e-125	63 - 306	100	244 / 244	None	ABC16874
MLOC_66367.2	2279	2e-70	1298 - 1442	100	145 / 145	CUST_27890_PI390587928	ABC16874
AK368925	851	1e-146	85 - 588	85	434 / 508	None	ABC11172 ABC16874 ABC48971
AK354964	819	1e-146	134 - 637	85	434 / 508	None	ABC11172 ABC16874 ABC48971