barSeed - Barley Seed Development Database

Probe ABC10932

Source Contig ABC10932

barSeed

Links

Affymetrix Source Sequence (902 bp)

>ABC10932 902
CGGGCTGTGTTCTCCTTTCCCCCAAATCGATCGACGGACGGAAGAAACTCCCATGGCGAT
TTGGTCCTCCTAGCAAGCAAGCAAGCAGGTAGCTCTTCCTCCCGATTCCCCTTCCTTCCT
TCTCGTCCGCCCGGCCGGCCGCCTGCTACATCGACGGAGCCTTTCTTCCACCGCCGGCCG
CCGCATCATCTAATCTGCCGCCGCCGAGTGCCCAAGGAACAGGAAGCACCGGGGCTCTTG
GTCGGTCAGGGTCAGGGAGCAACCAAGGAGATATATAGATAGATAGATGGCGGAATTGGT
CGGACCGCGGGTGTACAGCTGCTCCCACTGCCGGAACCACGTCTGCCTCCACGACGATAT
CATCTCCAAGGCCTTCCAGGGGAGGAATGGCCGTGCGTTTCTCTTCTCCCACGCCATGAA
CGTTACCACGGGGGCCAAGGAGGACCGGCAGCTCATGACGGGGCTTCACACCGTCGCCGA
CATCCATTGCCGTGACTGCCGTGAGGTGCTCGGATGGAAGTACGAGCGAGCCTACGAGGA
GTCCCAGAAGTACAAGGAGGGCAAGTTCATATTTGAAAAGGCCAAGATCGTGCAGGAGAA
TTGGTAGCAAATAATTGGAAGAAAGATTCAACCAATCCAAGATCGTGCCAGACAGAATGC
TCTCTTTATGATGGATCCTCCATGCCTTTGTACATAGCAGCAGTCCGTTTTCTTCTTTTC
AAAACTAGCAGTCTGTTGGTCTTATTTCCATGCCATTTGCAATTTCTTCTTTGAAATGGT
TTGTGATTTGTTGTGTGGAGAGACAGAATTATCATGTTCATTTGTGTTGGAACCATTTTC
TCATTGATCATAAATAAGATCGAAGGTTTAATAATGTGTGGTTTTAAAAAAAAAATAAAA
AA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_19653.2	1657	0.0	32 - 921	99	880 / 890	CUST_5303_PI390587928 CUST_28921_PI390587928	ABC10932 ABC18282
MLOC_19653.3	848	0.0	1 - 848	99	847 / 848	CUST_5303_PI390587928	ABC10932
MLOC_19654.1	2588	0.0	164 - 791	99	625 / 629	CUST_5303_PI390587928 CUST_28921_PI390587928	ABC10932 ABC18282
MLOC_19654.2	3951	1e-53	889 - 1003	100	115 / 115	CUST_6275_PI390587928 CUST_5303_PI390587928 CUST_28921_PI390587928	ABC10932 ABC18282
MLOC_19653.1	629	2e-125	97 - 368	97	264 / 272	None	ABC10932
MLOC_68860.1	1102	5e-116	505 - 837	89	298 / 333	None	ABC10932 ABC13209
MLOC_68860.2	1027	5e-116	430 - 762	89	298 / 333	None	ABC10932 ABC13209
MLOC_68860.4	1007	2e-76	578 - 824	88	217 / 247	None	ABC10932 ABC13209
MLOC_68860.3	1777	2e-76	1266 - 1512	88	217 / 247	None	ABC10932 ABC13209