barSeed - Barley Seed Development Database

Probe ABC10591

Source Contig ABC10591

barSeed

Links

Affymetrix Source Sequence (1212 bp)

>ABC10591 1212
GGTGGGTTTGGGAGCACTTGCAAAAATGCCTGCTTGCAATGTTCAGCTACTTGGAGCAAA
GAAGAAAAATCTTGCTGGATTTTCTAGTGCCACGTCTCAGTTTCGTGTTGGCTATCTTGA
ACAAGCCGAAGTATTTCAGAGCACCCCTCCAGCCCTGAGGACCCGTGCTTGCAGGGTTAT
AGCTGCAAAGGCAACTCTAGCAGCAAGAATTGATTCAACTAGAGGTGATCCAACTGGAAA
AGCTGGTCGCAACTTGTTAGAAGAAATTCGCAAGAAGATCGAGAAGTGGCAAGAACCGCC
TCCCGCAAAGCTTCCAAAACCACTTCCTGTTCCAGACTCTGAACCTAAAAAGAAGAGAGG
GGGTCGCCGCCTTCGAAAAATGAAAGAAAGATATGCCGTGACTGATATGATGAAGCTTGC
AAACCGAATGCAGTTTGGTATACCAGAGGAAAGCTCATTAGGTGATGGTTTGGGGGAAGG
TTATGGCATGCTTGGGCAGGCCGGAAGTGGGAAACTACGTGTCTCAGCTGCGCAAAACAA
ACTTGCTGCCAAAGTGGCAAAGAAATTCAAGGAGAGGAGTTATGGTACCGGTGGCGCAAC
ATCTGGACTGACATCTAGTTTGGCCTTTACACCAGTTCAGGGAATAGAGCTGTCAAACCC
ACATGCGCACGGGAACCTTCTTGGAAGCGGAACCCAGAGCACCTATTTCTCCGAGACGGG
CACATTTTCTCGGATCAATAATAGGCCATGAGTGACTGAGGTTGGAATCTAATCTGAAGA
TGAAAAGGGAGTGTGAGATTAAAAGAGAGGATTGTTTCTTGGTCTCATTCGGCACACAAC
GCCCAACATCTCTTGGGATTCATGCACTTGCACAAAGTCAGCTTGTATTCTCAGTTGTAC
CGCGGGGGCTGGGTTTGTAATGTAAGCACAGAAAGCGCACCAGAACATGACAAGGTCTGA
AGTCAGGCGTTACCTATGTTTGGAGCGTGGATAATCTTTTCTTTCTAGAGAACCCATTGG
AACTGAATTGTTGAACTAGCATAGGCATGCTGCTGGATCATTCCATACCACAATGCGAGT
TGAGCTCGAGATGCATACTTGTTGTTTTCTTTTCCTGTGGAATTGTTGAAGTGCTTCATG
GCAGGCTGCGGTGTTTGACAATGGTATGTGTTGTAATTAAGCATGATCATGTAACAAAAA
AAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_70917.3	1974	0.0	757 - 1923	99	1167 / 1169	CUST_34803_PI390587928	ABC10591
MLOC_70917.1	1976	4e-163	1665 - 1976	100	312 / 312	CUST_34803_PI390587928	ABC10591
MLOC_70917.2	1709	2e-122	1471 - 1709	100	239 / 239	CUST_34803_PI390587928	ABC10591
AK374558	4099	2e-61	3488 - 3658	92	157 / 171	CUST_38464_PI390587928	ABC10591
MLOC_22352.1	537	5e-152	92 - 494	91	367 / 404	None	ABC10591
MLOC_3394.1	865	1e-148	506 - 865	93	337 / 362	None	ABC10591
MLOC_39596.1	701	2e-141	307 - 646	94	318 / 340	CUST_32293_PI390587928	ABC10591
AK367179	1036	3e-129	440 - 771	92	305 / 332	CUST_38464_PI390587928	ABC10591
MLOC_39595.1	450	1e-128	130 - 434	94	287 / 305	None	ABC10591
MLOC_22352.2	577	4e-59	374 - 534	93	150 / 162	None	ABC10591
MLOC_3394.2	518	2e-72	325 - 518	92	180 / 195	None	ABC10591
MLOC_64213.1	2423	2e-61	568 - 738	92	157 / 171	CUST_38464_PI390587928 CUST_5986_PI390587928	ABC10591 ABC12095
MLOC_64213.2	2859	2e-61	568 - 738	92	157 / 171	CUST_38464_PI390587928 CUST_5986_PI390587928	ABC10591 ABC12095
MLOC_64213.5	2185	2e-61	561 - 731	92	157 / 171	CUST_38464_PI390587928 CUST_5986_PI390587928	ABC10591 ABC12095
MLOC_64213.6	2171	2e-61	561 - 731	92	157 / 171	CUST_38464_PI390587928 CUST_5986_PI390587928	ABC10591 ABC12095
MLOC_64213.3	2463	2e-61	568 - 738	92	157 / 171	CUST_38464_PI390587928 CUST_5986_PI390587928	ABC10591 ABC12095
MLOC_64213.4	2449	2e-61	568 - 738	92	157 / 171	CUST_38464_PI390587928 CUST_5986_PI390587928	ABC10591 ABC12095