barSeed - Barley Seed Development Database

Probe ABC09725

Source Contig ABC09725

barSeed

Links

Affymetrix Source Sequence (1158 bp)

>ABC09725 1158
GTGCTGGATCTGCTTTGGAGCAGCTACAGACCTATCTTCATCAGTCAGCAAATCAAATAC
CAAGGACAATCGGTGTAGCAATTCCAATGAAGGCAACCTTTTTCATAACGTATGTAATGG
TCGATGGATGGGCTGGGGTAGCTGGTGAAATATTGAGATTGAAGCCATTGGTTATCTTCC
ACTTGAAAAACTTTTTCTTGGTCAAGACTGAGAAAGACAGAGAAGAGGCGATGGACCCCG
GAAGTATTGGTTTTGACTCGAATGAACCCCAAATACAGCTCTATTTCTTACTTGGTCTCG
TCTATGCTGTGGTGACGCCATTTTTGCTTCCATTCATATTGGTATTCTTTGTGCTCGCAT
ACGTGGTCTACCGCCATCAGATAATAAATGTGTACAATCAAGAATATGAGAGTGCAGCTG
CATTTTGGCCAAGTGTTCATGGGCGTATAATCACAGCATTGATCGTATCACAGCTGCTTT
TCCTTGGATTATTAAGCACAAAAGGCGCAGGCCAGTCAACACCAGTGCTCCTTGTTCTTC
CTGTGGTGACCTTTTATTTCCACAAATACTGCAAGAACCGCTATGAACCTGCTTTTGTAG
AATATCCATTGCAGGAGGCAATGAGGAAAGACACCCTAGAACGTGCGCGAGAGCCAGGGT
TTGACCTGAAAACGTACCTGGCAAGTGCCTACATCCACCCGGTTTTCAAAGGCGAGGACG
ATGAGAAATTCTCCATGATGGATGAAGGGGAGGCAGACCAGGTCCTCGTGGCAACGAAGC
GGCAATCGAGACGGAACACCCCTGTCCCGAGCAGAAACAACGGTTCAGAAGCGCCTTCTA
TGCCTGAAATTGTAAATGATCAGCGACTATGATAGAGTTTGGCCGTGTACATTGAATAAA
GAACACAGTAATGCGTTTCATCATTGCTTTTTTCCTTTCAGTTGTTGGTATTTCTTTTTC
ACAATATAAAGGAGCTATGACGAATATTATTGGACTAGACGTAGTATGTGTGGGCCTTTG
CGTTAGGAGTACAAATCGTTTACTTGTCCTTCAAGGACTCTCATGTACTGCTCCTCGTAT
ATACTTCATGTAGTCGTACCTAAAGATGGTCTGTCGTTTCGTGCTTTTAATACTTCATCT
CCAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK372113	2701	0.0	1602 - 2701	100	1100 / 1100	CUST_31891_PI390587928	ABC09725
MLOC_35103.1	890	0.0	1 - 559	100	559 / 559	None	ABC09725
MLOC_37862.1	2618	6e-171	1229 - 1557	99	328 / 329	None	ABC09725
AK376298	2656	9e-140	1678 - 2352	80	547 / 682	CUST_4026_PI390587928	ABC09725 ABC18053
MLOC_57666.1	2115	9e-140	1210 - 1884	80	547 / 682	None	ABC09725 ABC18053
MLOC_52397.1	2421	3e-119	635 - 1338	78	556 / 713	CUST_19357_PI390587928 CUST_11080_PI390587928	ABC09725 ABC18094
MLOC_52397.2	2613	3e-119	607 - 1310	78	556 / 713	CUST_11080_PI390587928 CUST_19357_PI390587928	ABC09725 ABC18053 ABC18094
AK250130.1	3143	2e-117	1819 - 2522	78	555 / 713	CUST_11080_PI390587928 CUST_19357_PI390587928	ABC09725 ABC18053 ABC18094