barSeed - Barley Seed Development Database

Probe ABC09075

Source Contig ABC09075

barSeed

Links

Affymetrix Source Sequence (1145 bp)

>ABC09075 1145
GCACAACAGAAGCACTACAGCAACCGCGCGCCTGGAAGTGTACTTTGTACACGTTCATTG
GCGTAGCTAGCTAGGCAGACATGGCGAAGAAAGTGCAAGTGATCGCCATGCTCCTGGCCC
TGAACCTTCTCTTCTTCACCTTCGCCAACGCCACTGGACGTCCCTGCCCACCTAGCGGGG
GCAGCGGCGGGGGAGGAGGGGGCAGCGGGGGCGGGGGAGGCGGCAATTGTAATGGCGGGA
ACTGTGGTGGGGGCGGAAACGGTGGGGGCGGCAATTGTGGTGGCGGGAACTGTGGTGGGG
GCGGAAACGGTGGTGGTGGGACTGGTGGAGGCGGAAACGGTGGTGGTGGCAATGGTGGAG
GCGGAAACTGTCCGGGAGGCGGAAACTGTGGCGGGAACGGTGGCGGTGGGAATGATGGCG
GTGGGAATGGTGGTGGCGGTGGGAATGGTGGCGGTGGGAATGGTGGCGGCGGGAACGGTG
GTGGTGGAAACAGCACCCAGTGCCCGCTGGATGCGCTGAAGCTGGGGGTGTGCGCGAACG
TGCTCGGCGGGCTGCTGAACCTGACTCTGGGGAGCCCGCCGGTGCAGCCGTGCTGCACGC
TGATCCAGGGGCTGGCGGACCTGGAGGCGGCGCTGTGCCTGTGCACGACGCTGAACCTCA
ACCTTCTGGGCATCAACCTCCGCTTGCCCATCGCCCTCAGCCTCGTCCTCAACAACTGCG
GCAGGAACGTCCCCTCCGGCTTCCAGTGCCCCAACTGAGACCGGACACTGCACCTCATGC
ATGCATGCATGCATGCATGCAACGCACGTATGATCGGCTATTTAATTTGAAGTACCACCG
CGTACTTAATTGTGTGCTTTAATTACGTAATCATCTGCTGTTCTGGCTTTATGTGTGACT
GGATTTGGATTGCGGGGAAGCTACGTACTACCACTTCTCCAGGTTCTACGTACGTACATG
CACGCACGCACTGTTACCTGTGTGCGTAAGGATTTCGTTGTGTGTGTGTGTGTGCTTGAT
GTGTTATTGTAAACGCCACATGTTTGTGATGAGTTCGTTAATGCCAGAATGCTCGTGATG
TACCGCTATCTTCGACTAAATAAAAGATTTGCCATTTTCCATTATTGTTAAAAAAAAAAA
AAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_38318.1	950	0.0	1 - 769	98	756 / 773	CUST_16181_PI390587928	ABC04435 ABC09075
AK372660	707	0.0	2 - 707	100	706 / 706	CUST_16181_PI390587928	ABC04435 ABC09075
MLOC_76002.1	434	3e-80	254 - 430	97	175 / 180	None	ABC09075
AK374366	1107	6e-67	435 - 687	85	215 / 253	CUST_16179_PI390587928	ABC04433 ABC04435 ABC09075
MLOC_33896.2	648	3e-65	54 - 306	85	214 / 253	None	ABC04433 ABC04435 ABC09075
MLOC_33896.1	996	3e-65	216 - 468	85	214 / 253	CUST_16180_PI390587928	ABC04433 ABC04435 ABC09075