barSeed - Barley Seed Development Database

Probe ABC08322

Source Contig ABC08322

barSeed

Links

Affymetrix Source Sequence (1352 bp)

>ABC08322 1352
AAAGTCGTCTAAACCCCCTGGAAGGAGGGGGAAATCCCTAATAACCCCCGCTCGCCTTTC
CACGGCGAAAGGCATCCCGGCGGCGATGGCGGCGGCCGCGGCAAGGTCCGGATCCCGGCG
CTTGTTCTCCATATCCGCCCTGGTGCCTCCGAAGCCGCCAACCCCTCCCCCGAAGGCAGA
CCCCTTCGCCAGCCTCTTCATCCCCGGGTTAAGCAAGCGAACAACAACTGATGGACTTAG
GGAAGCTTTTGCAAAGTCTGGTGAAGTTGTGCATGCATCATCTGTAAAAAGTTCAAGGTG
GTATATGATCAGTGCAAACCGTTCAGGTCCTTTGACAGTGCGTAAAGAATACCGCAAAGT
GCTTCCTTCTTTCATAAGGCCATCTGCATCTTACTCCACAAAAGCCTCAGAAAAAAGACC
AAAACAGGAGAGAACAGACTTGACGACTGTTGAAGATCCCTTTAATGCCCCTACCTACAA
TATACCTGAGAAGCCAGTGACATTTGTCGAGGGGGCCTCTTACAGTGTTGTAATACTTGC
TGGGCTTGGAGTTGCTGCATTGGCTGGATATGCTGTTCTCAAAGAGCTTATATTTGAACC
AAAAGAGTACAAGATTTTTGGGAAAGCTCTAGCAAGAGTTCAGAGTGATAGTCAGGTTAC
AGCCAAAATTGGTTACCCTATAACTGGTTATGGTACGGAATCCAGAAACCGTGCAGCTCG
GCAGCGCATCCAAAACAGGGTTTGGACAGATGAGGATGGTGTTGAACATGTGGAGGTTGC
CTTTCATATCCGGGGGCCACATGGAGCTGGAAAGGTGTTTGCAGAGATGTTCAAAGATAA
CGCCGACAGGACATGGAAGTTCACGTTTCTTCTCGTCGAGATTACGTCACCGCGACCCGC
ACAAATCATGTTAGAATCTTACCTACCAGCATAAGGATGCAAGAGACAACATCAGCTAGC
AGTGGCACATCCATTCGGCAACTTCTTTTTACGTCATATATCTCCAATGGCTGCATCTCA
TGTTAAATACCCGTCCTCGGGTTAAAGAAGTTGTGAATTTTGAACTTCCCCGAAAGCATA
AGTAGGAGGAAGATGAACCATCAGAGCTGCTGACCATGTCTAGCATCTTAGATATGCTGT
TGCTTTGTTTAGCTGAAAGGCGTGCAGGCACATGTATACAACCCATCTTTCCCTCAAACA
TGGGACGGAGGAGGGAGTGATCCTTCATCTATCGAGTTTTAGTCCCATTTCAGGCAGTTT
TTTTAATGATGCCTATGGATTTCGTGCAAACCTTCATTTTTGATATCCAAATAGCAATAA
TATCTGGTTACACTTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK372047	1365	0.0	25 - 1361	99	1336 / 1337	CUST_29006_PI390587928	ABC08321 ABC08322
MLOC_60072.1	1211	0.0	1 - 789	100	789 / 789	None	ABC08321 ABC08322
MLOC_60072.2	732	0.0	1 - 600	100	600 / 600	None	ABC08321 ABC08322
MLOC_55072.1	557	0.0	113 - 540	100	428 / 428	None	ABC08322
AK372094	1360	0.0	235 - 901	85	570 / 674	CUST_11605_PI390587928 CUST_29008_PI390587928	ABC08321 ABC08322
MLOC_55072.3	468	1e-113	3 - 225	100	223 / 223	None	ABC08322
MLOC_55072.2	444	1e-104	12 - 218	100	207 / 207	None	ABC08322
MLOC_55073.1	287	1e-104	80 - 286	100	207 / 207	None	ABC08322
MLOC_17492.1	1239	8e-101	244 - 584	86	294 / 341	CUST_29008_PI390587928	ABC08321 ABC08322