barSeed - Barley Seed Development Database

Probe ABC08282

Source Contig ABC08282

barSeed

Links

Affymetrix Source Sequence (1322 bp)

>ABC08282 1322
GCGCGAGTTCAGGTGAAGGAGGCCATGGCGATGCTCAAGGCGGCCGTGCTGTGGCGCAAG
AGCTTCGGCATCGACGCGCTCCTCGACGCCGACCTCGGCGTGCCGGAGCTGGAGAACGTG
GTGTTCTACCGCGGCGCCGACCGCGAGGGCCACCCCGTCTGCTACAACGTCTACAGCGAG
TTCCAGGACAAGGACCTCTACGAGAAGGCCTTCGGCGACGACGAGAAGCGGGAGCGCTTC
CTCAAGTGGCGCATCCAGCTCCTCGAGCGCGGCATCCGGGAGCAGCTGGACTTCTCGCCC
AGCGGCATCTGCTCCATGGTGCAGGTCACCGACCTCAAGAACTCGCCGCCCATGCTTGGC
AAGCACCGTGCCGTCACCCGCCAGGCGCTCGCGCTGCTCCAGGACAACTACCCCGAGTTC
ATCGCCAAGAAGGTGTTCATCAATGTGCCATGGTGGTATCTTGCGGCAAACAAGGTGATG
AGCCCGTTCCTCACACAGCGCACCAAGAGCAAATTCACATTTTGCGGCCCAGCCAAGACT
GCAGAGACCCTTTTCAGATACATCGCGCCCGAGCAAGTCCCTGTCCAATTTGGTGGTCTC
TTCAAGGAGGATGATACTGAATTCTCGACTTCTGATGGCGTCACTGAGCTCACTGTCAAG
CCTTCTTCCAAAGAAACTATCGAGATTCCTGCTACTGAGAACTCCACGGTCGTGTGGGAG
CTCCGCGTGCTTGGATGGGAGGTGAGCTACGGCGTGGAGTTCACCCCCGACGCAGAGGGT
GGCTACACGGTCATCGTGCAGAAGACGAGGAAGGTGCCCGCCAATGAGGAACCGATCATG
AAGGGTAGCTTCAAAGCAAGCGAGCCTGGCAAGGTCTTGCTTACCGTCAACAACCCAACA
TCGAAGAAGAAGAAGCTGCTGTGCCGATTCAAGGTCAAGAGCTCCACCGAATCCGCCTGA
GGCTCCTCAACTGATACTATCGCCAACCAGGTCCATACCACCACCATTTGAACATTGTTG
CATGATAGAAGGGGGAACAATAAGATTTTAGCTGTCCGTTTTGGCGTCGGGTTCTTTAAT
TTGTTGGGCTTGCTGTTTTTTGGGGATCAGACTTGTCGTGTGCGTTTACTTGAAACCAAA
GTGGGCTTGTGCTATGAGATAGCTGGGATCAGAAGGTGGGGAAAATATTGAGATAGTGAT
GGTTCTTGCCATCAGGATGTGCCGAACAAGTGTCGCTGATCTGTAAAAAATTCTGTCTGT
ACATGGTATCCGTTGATTCTCTTTCATCTGCATGTCGATTTTTAAAAAAAAAAAAAAAAA
AA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK373787	2367	0.0	1105 - 2367	99	1258 / 1263	None	ABC08282
MLOC_37582.1	754	0.0	72 - 754	99	682 / 684	None	ABC08282
MLOC_37582.2	1052	1e-68	72 - 216	99	144 / 145	CUST_2241_PI390587928	ABC08282
MLOC_37581.1	965	0.0	412 - 965	99	552 / 554	None	ABC08282
MLOC_212.1	2573	0.0	1181 - 2144	85	824 / 965	CUST_14649_PI390587928 CUST_15337_PI390587928	ABC08282 ABC15559 ABC22451 ABC46891 ABC46892
AK356601	2264	0.0	997 - 1960	85	822 / 965	CUST_14649_PI390587928 CUST_15337_PI390587928	ABC08282 ABC15559 ABC22451 ABC46891 ABC46892
MLOC_212.2	729	0.0	97 - 729	86	545 / 633	CUST_15337_PI390587928	ABC08282 ABC15559 ABC46891