- Probe ABC07937
- Source Contig ABC07937
Affymetrix Source Sequence (5340 bp)
>ABC07937 5340 ATGGCGACGCGGTCGCTGCTGCTGCTCTGCTTGTGTCTCTGCTTATTCGCGCCCCGCCTG TGCTCGTCCAAGGAGGAGGGGCCGCTCGCCGCCGGCGGGTACCGTGTTAGCCGCGTCGCG GTGGACGATGGAGGGCGGCGGCTGCGCGCCGAGGCAGCGGCCGCCACCGGCGGCGCGTCG TCCACCGGCGACGTGCAGAGGCTCGCCGTGTACGCCAGGTGCGTTCAGACATCAAAGTTT TTTTTACGGGATGCCAGACATAAAAGTTCAACGCATGCCGGAGCATTTTTTTTCTTCTGT ACAAGACAAGCGTGGTGTGGACCTCGCGTAGTGGTGAGAATCTAATCAGTAGTACGTACT GATCCGTGTCCAGTCCGCGTGTCGGACTACTCGCGATCGAGCGTGACCACTTTCTTAGCC CAAGTCTACGAAGTTGATTCTGATGCCCAGCAGTACATCACATGACAGCCACTAATGCTT TTGGTCCAAACCCAGGACTAGCCACAGTGCAACGAAGACAGTCCAAACACTCGTGACTTG TGCTCTGCTCGAACCGCACGGCACGCCGGTAGATGAGATGTCACGTACACGCGCGCATGG CCCATCGCCATCGGCATCAACGAATGATCACACGGCAAAAGGCAGCTACATGTAGTCGTA GTAGGAGTAGCCGAGCAGATGATATGTCACGTACTACGTTGCATACGCGTACGTACCGTC GCCATCTTTTGGCCCATGCATGCATGCTCGGACAACCCTTGCCGTCCAATTCCAAAGGAA AGCCAACAAAATAAAGGGTGGTGCAGATAAGGTGGTCACAAACTCACATCATGAGAGGTA TATGCATGGTCCATATAGTTCCATACTATACACTGTTCCGGCCGGATTATGCTTTTGTCT TTCACCGGCCTTCTTTCACGTCAATATTTGGCAAGTAGCTCTGTCCGGTACCGTGAAAAG AATGTATTTATGTGCATCAATATTTGATGTCACGCACAAAAATTTACTACATGTTTCGCA CTCCATACAACTACAGATGGAGTATTATGTAAAATAAATATTTGAGTCATATCACAGAAG ACACCATAAATTAGAAATTAGGTTGACTGTATATAATTTACTTCATCGCCTGGGAGAAAA TTAAAAATCGATTCCGTTAAAGTATTTTACATTGCTCATTGTTCTATTTTGGACTAGATA TATGAAAGAAAGTGTACCCTCGAAAAAAGGGAATAAAGTGGAGCTTATAAACGGAAGGGG ATGATCGACCAAGGACTCACCGAGTAGCAATTTATCAATACCACAAACCCTGATACTAAC ATAGATATACAAGTTAATTGTGTATATATTCCTTCAATTTTAAGGATGGGATATCTACTT TTCAACCCTTGACACTTACTTCAACTTCCACTTTCATATATTTTACAATAAAAAACTGTT TTTTTTATTTTCTTTACTAATTCTTGAGAGAGAATCCAGCGAAGACGTTGAGATTGAAGC ATAATTTTATCCTACATACACTTCCATCCTATAGAAATTTTAAATTTTGTTTACATGCAC CAATTAAATGACATTTTTGGACCATCTCTATCCAAGTGGATGATGATTTCTTAAATTTCA CTTGATTTAGATCAATGAAATTTCAGTAAAACTGTAACTTGGGCTTAGACCCAAATGCAT TTTCCTCTCTTTTTAAAGAAGTGCACTTTTTCCCCTTTTGAGTAAGCAAAGTTTCCCTTT TTAAAATCAATCGAGACAAATTTATGAGTTGAGTTAGAGGATAGTGGGAATTTAGACAAA AATATCCGCATTCACAATACCAAATTAATATCATTATATTTATCACCGAGTATATTTCTG TATTGTATTTATTTGGTAATGTATATATTGATACTTTTAAATATAAATGTGTCAGTTTTC ATAAAGTGTGACTTAAGACAATCATAATATGTTTTTTTGCGTGCTCACAACCATAATATG TCGTGTAAAAAGGAAAGGATGAAGTAGGTTCAAACAATGTAGCCCCATTTGTTTTTCTTC TGAAGCTACTACATATGCTTACAAAAGTACAATAAAATTCAGATTAAGTAATGAATATCA TTTTTTAACTATAATGTGTATCATTTGTGTCCATAAAAATCGCCACCAGGGAACCAGTCC CACAACTACTGGCAAGAAAATATGTACCATCTAGTAAACTGATATTTTTTATTTTCTTTA TTAATTGTTGAGAGAGAATCCAGCAAAGACGTTGAGATTGAATCGTTATCCTGCACACCC TTCCTTACTCTAGTGATTCTAAAAAAAATTATGTGTGCCAATTAAACGACATTTGGATCA CCTCTATCCAAGTTGACCATGATTTTCTTAAATCTCATTTGATTTAGAAAAATGGAATTT TGGTGAGAATTGTGCTTATAACCAATTGCATTTTTTCTCTTTATTTAAAGAAGTGCATTT TTTCCCTTTTGAGTAAGCAAAGTTGCCGTTTTTAAAACCAGTTCAGACAAAATTATGAGT TGAGTTACACTAGAGTGACAATTTAGTGGTAACCCCTCCGTTTGGTTTAATCAGCATATA GAATTTGTCTTACGTCAACTTTTAAAAATTTGACCGAGTCTATAGATAAAAATATCATCA TTCACAATACCAAATCAATATCATTATATTTATCATTGAGTACATTTTTTGTATTGTATC TATTTGGTATTGTAATTTCTAAATATTGATACTTTTAAACATAATGTGGTCAAATTTTAT AAAGTTTGACATAAGGCAACCTAATATGTTGTGTAAAAAGAAAAGGAGGAAATAGCTTCA AACAATGCAGCCCCATTTGATTTTGTTCTGAATCTACTATACATGCTTACAAAAGTAAAA CAAAATTCAGTTTAAGTAATGAATATCATTTGTGTCCACAAAAATCGCCACCAGTGAACC AGCCCTACAGCTACTGGCAGGAAAATGGTATTGCACTGTTAGTATATTATAGATCCAACA ACAACGCAAAGGCACAGATTAGTTATTGTTATCCGGATCTTTTATCTCTTGATTGACACG CTACGATGCTCCTGAAACCACTGTAGCCAACAACTTGCACGTATATGATCTTGTCAGGAA TCCATTTATAGAACGGAGCAGATCCTCCTCCATTTCTTTTCCAAAACCGATCCAAATTAT TGGCGCTATCATCGATCTGCGCAGACCGCGCTACTCAGTTCTGTCAGCGGATTAACTTTT TAGACGGTACAGCTAGTAACTACCACTGCCTCTGTTTCTAAATATAAAGACGTTTTAGCA GGTTAAATTAAACCGTCAATACGTCTTCGTATTTGGTACGCGCCTGTAGCAACTCGGCAG CCCTAACATTCATCCAAACATGAGTAGCTAAACTGCGCGGTTCACATCAAGAGTTGATTC ATTTAGTCCACAAGCCAATGTACGTTACAGAAATAAACACTGCAGATTTACGCTGCCCTC AAGCCTGCAAAGCCAAAAGCTCACGGCCTTTTAGCTGATCATTACTACTCAATTATTACT TAGTTCAGGAAGCAATGTTAAATGAAGCACATCGTGTATCGTCTTCGGGATCTGCTAATA AACTGGTGGAAAGCGCCGTGCTTTGTCAGTTCAGCTGTGCTGTATCCTTCCTCTGAAGAA ACCAAGGATCGGAATATTTCTCTGGCAGACAAAATCGCATCCCTGTCCGACTGATTGATT GGCTGGTCATCGCCACTGCTTACTTATTCGCAGAGCCGGATCTGTCTTGCACATTATATT ATATTAGCTGGCCCGGCCGGCCTCCTTGCGCTGCGCCTGCACCGCACACCCGGTGCTCCC CTTCCCTGCGCGTGCTCCGATGGCGACGCCGTCCGCGGCAGACAACTGTTGTCCACCCCT CGTGACCCTCCTCCTCATCGTCCTCCTCCCCCTGGCCGTCGCCTTGCCCTCGGGCGATGG CTCCGGCGGCGGGGGGTACGACGTCGTGTCGGTGACCCAGTCGGGGAGCGCTCTGTCGGC GCGGCTGGAGCTGGCGCTTGCCGGCGAGACGCCGGCCGACGCGGCGCTCGGGCCTGGTGT CCAGAGGCTCCGCCTCACTGCAAGGCAAGTGCTTCGTGGCTTGGGTTAATCTTCAACTCT CACTCTCGCCGGGAGACGGGAGTAGGTAGCGTGACCAGTGATTACTTTGATCGTCCGTCC GGACTACTCGTTAGGAGTAATTGCTGTTCCCCCAGAGAAATTTCTGAGTTCATTGGGTCG CCGACAGGCCGACGTACAAGTTCCTATGATGAGGAAGATACAAAAAAAGGACTGTAGACT GTAGGGAGTGTACAGGAAGAGCAAAAAAATTACAGTGACCGATCACACTGGGACTCGAAC CCAGAATCTCCCGCTCCGGAGGCGAGCGCCTTATCCATTAGGCCATGCGACCACTGTGAT ATCGGTTTTGTAATTCAGGTACTTGTTCATATACTTACCATTTCATTTGCCATGCCGATG GCAGCCTCGAGACGGACAGCCGGCTGCGCGTGCGCATCACCGACGCCGACCACCCGCGAT GGGAGGTGCCGCAAGACATCATCCCGCGCCCCGCGCCGGCGGACGTCCTCCACGACGCGC CGCCCGCCTCCTCGGCGCCACTCCAGGGCAGCCGCGTCCTGTCCGCCGCGGGCTCGGACC TCGTGCTCACCGTCCACGCCTCCCCGTTCCGCTTCACCGTGTCCCGCCGCTCCACCGGCG ACATCCTCTTCGACACCGCCCCCGGCCTCGTCTTCAGGGACAAGTACCTGGAGGTGACGT CGGCGCTGCCGGCGGGCCGTGCGTCGCTGTACGGGCTGGGCGAGCACACGAAGAGCTCGT TCCGGCTGCGGCACAACGACTCCTTCACGCTCTGGAACGCCGACATCGGCGCGTCCTACG TGGACGTCAACCTCTACGGCTCGCACCCCTTCTACATGGACGTGCGGCCACCGGGGACCG CGCACGGCGTGCTCCTGCTCAGCAGCAACGGCATGGACGTGCTCTACGGCGGGTCCTACG TCACCTACAAGGTCATCGGCGGCGTCCTCGACTTCTACTTCTTCGCCGGCCCCAACCCCC TCGCCGTCGTCGACCAGTACACCCAGCTCATCGGCCGCCCTGCCCCCATGCCGTACTGGT CCTTCGGTAAGGAGCTGACATTGCATTCCTGCACTTACTTACACTAGTACTCTGTTTCTT GCATCTGTATGAGCTGAACGGCCATGGCGAATGCTGGTTGCTTGCAGGGTTCCACCAGTG CCGGTACGGGTACCTGAACGTGTCTGACCTGGAGCGTGTGGTGGCCGGCTACGCCAAGGC
Probe Sequence's BLAST hits in Barley MLOC transcripts
Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
---|---|---|---|---|---|---|---|
MLOC_66806.4 | 3995 | 0.0 | 1 - 1984 | 99 | 1982 / 1984 | CUST_326_PI415269222 CUST_327_PI415269222 CUST_13506_PI390587928 CUST_328_PI415269222 CUST_42101_PI390587928 | ABC07937 ABC07938 ABC12639 |
MLOC_66806.7 | 3080 | 0.0 | 1 - 1049 | 100 | 1049 / 1049 | CUST_326_PI415269222 CUST_327_PI415269222 CUST_13506_PI390587928 CUST_328_PI415269222 CUST_42101_PI390587928 | ABC07937 ABC07938 ABC12639 |
MLOC_66806.3 | 3579 | 0.0 | 859 - 1523 | 100 | 665 / 665 | CUST_326_PI415269222 CUST_327_PI415269222 CUST_13506_PI390587928 CUST_328_PI415269222 CUST_42101_PI390587928 | ABC07937 ABC07938 ABC12639 |
MLOC_66806.2 | 3225 | 3e-110 | 313 - 530 | 100 | 218 / 218 | CUST_326_PI415269222 CUST_327_PI415269222 CUST_13506_PI390587928 CUST_328_PI415269222 CUST_42101_PI390587928 | ABC07937 ABC07938 ABC12639 |
MLOC_66806.6 | 2866 | 2e-151 | 3 - 294 | 100 | 292 / 292 | CUST_326_PI415269222 CUST_327_PI415269222 CUST_328_PI415269222 CUST_42101_PI390587928 | ABC07937 ABC07938 ABC12639 |
MLOC_66806.5 | 1096 | 3e-125 | 529 - 773 | 100 | 245 / 245 | None | ABC07937 ABC07938 |
MLOC_61980.1 | 2677 | 9e-136 | 252 - 925 | 80 | 546 / 681 | None | ABC07937 ABC07938 ABC12639 |
MLOC_11993.3 | 2529 | 1e-119 | 1856 - 2529 | 79 | 540 / 684 | CUST_30741_PI390587928 | ABC07937 ABC07938 ABC12639 |
AK375658 | 2684 | 2e-118 | 224 - 904 | 79 | 543 / 690 | CUST_30741_PI390587928 | ABC07937 ABC07938 ABC12639 |
MLOC_11993.1 | 2435 | 2e-118 | 1764 - 2435 | 79 | 538 / 682 | CUST_30741_PI390587928 | ABC07937 ABC07938 ABC12639 |
MLOC_11993.2 | 2436 | 2e-117 | 1764 - 2436 | 79 | 538 / 683 | CUST_30741_PI390587928 | ABC07937 ABC07938 ABC12639 |
MLOC_66806.1 | 588 | 4e-84 | 418 - 588 | 100 | 171 / 171 | None | ABC07937 |