barSeed - Barley Seed Development Database

Probe ABC07171

Source Contig ABC07171

barSeed

Links

Affymetrix Source Sequence (965 bp)

>ABC07171 965
GTCCCCCGGGCTGAGGAATTCGGACGAGGGCGGAAGGAGGTCTGAAGCTGCTGGGCCTGA
CGGTGAGCCCGTTCGTGATCCGTGTACGCATGGCACTGCAGATGAAACGCGTGGGCTACG
AGTACATGGAGCAGGACCTGTTCACCAAGGGCGAGCTCCTCCTCAAGTCCAACCCGGTGC
ACATGAAGGTCCCGGTGCTCATCCACGACGGCAAATCCATCTGCGAGTCGCTGGCCATCG
TGCAGTACGTCGACGAGGTCTGGGCCGCCACGGGCACCTCCATCCTCCCCGCCGACCCCT
ACGACCGCGCCGCCGCTCGCTTCTGGGCCGCCTACGCCGACAGCAAGCTCTTGCCTGCGT
GGGTGGGCATCATGTGGGCGGCGACGGAGGAGGAGAGAGCGGAGAAGGTCGGCGACACGC
TCGCGGCTATCGGCCAACTGGAGGAGGCGTTCGGAAAGTGCTCCAACGGAAAGCCCTTCT
TCGCCGGCGATTCCGTCGGCTACCTCGATCTCGTCGTCGGTTCGCAGTTGCTCTGGTTCG
AGGTGCTGCGGAAGATGTTCGGCGTCGTGGTCATTGAGGCCTGCAGGGCTCCCTTCTTGG
CCGCGTGGGTGAAGCGGTTTTGGGAGACTGATACGGCGAAGGCGGTGGTGCCGGACGTTG
GCACGGCGGCGGAGTACCTGAAGAAGCTTCAGTCTCATCGGGCTGGTGCCACGGTTGCCC
AGTTGCTGTCGTGACAAAATCACAAAAGTGCATGTAGAAATTGTTGATCCCGGTAGCCAG
TTTACAGCGTATTTTTGTTTAGGCCAGCTCTGGTCATGAGTTGCAAGGATGCAAAGAATG
AAGAGGTTTCCATCCTGACACCAAAGAGGATGTCAAGTTGTTTGTAAGAAATCACAAGTA
TGGTCTTGTTATTTTTTTAAAGAGGAATATATTAATATCAAGCAGGTATGGTCTTGCTAT
TTATC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_65259.2	951	0.0	38 - 951	100	914 / 914	CUST_5316_PI390587928	ABC07171
MLOC_65259.3	808	0.0	1 - 808	99	805 / 816	CUST_5316_PI390587928	ABC07171
MLOC_65259.1	1133	1e-167	53 - 387	99	331 / 336	CUST_5316_PI390587928 CUST_23851_PI390587928	ABC07171
MLOC_19475.3	1370	1e-108	205 - 822	79	491 / 625	None	ABC07171 ABC08937 ABC08958
MLOC_19475.2	764	8e-100	47 - 573	80	424 / 533	None	ABC07171 ABC08937 ABC08958
MLOC_19475.4	998	1e-82	224 - 569	83	290 / 350	None	ABC07171 ABC08937 ABC08958
MLOC_19475.1	1245	1e-78	630 - 926	85	255 / 301	CUST_37197_PI390587928	ABC07171 ABC08937 ABC08958
MLOC_68295.1	1117	6e-61	287 - 744	77	359 / 469	CUST_30580_PI390587928	ABC07171