barSeed - Barley Seed Development Database

Probe ABC07147

Source Contig ABC07147

barSeed

Links

Affymetrix Source Sequence (1372 bp)

>ABC07147 1372
GGGGAACCCAGCCCTGGAGAGTTGCATTGTGCTCCATCCAAATTCTTCGTCCTGTTTGAC
ACAAACACCGATGGTCTCATCTCGTTTGCCGAGTACATCTTTTTTGTTACATTACTCAGC
ATTCCTGAGTCAAGCTTCAGTGCGGCCTTCAAAATGTTTGACGTCGACCTCAGTGGTTAA
TTTCTCTTGTCGCCCAGAAAAAAAGACCTGCTCTTTATGAGCATGTTCAATCATCTGGCT
TGTTAGTTGATGGTAAAAGAAGGGGAGATAGACAAAGAAGAGTTCAAGAAAGTAATGGCA
TTGATGCGGTCCTATAACAGACAAGGAGCTGCCCACAGGGATGGCTTACGTACAGGATTT
AAAGTTGGCCAGTCTGTGGAAAATGGTGGGGTCGTTGAGTATTTCTTTGGTAGTGATGGG
AATGAACCTCTACACTTTGATAAGTTCACAAGTTTTTTGAAGGAATTGCATGAAGAGATT
ATTCGTCTGGAATTCAGTCATTATGATGTCAATTCGACAAACACTATCCCAGCAAAGGAT
TTTGCACTGTCCATGGTGGCTTCTGCTGACATGAATCACATTAGCAAGCTACTTGATAGA
GCTGATACATTGGGCAATGACCCTTATCTCAAGCACTTACGCATTACGTTTGAGGAGTTT
AAGGCATTTGCGGATTTACGTCGAAGATTGGAATCATTGACGATGGCTATATTTGCTTAT
GGTCAAGTAAATGGGCAATTGACAAAGCAGGATCTGAAGCGTGCAGCACAGCATGTCTGT
GGTGTTGAATTAACTGACAGAGTGGTGGACATCATTTTCCATGTGTTTGACACGAACAAT
GATGGGCACCTGAGCTCAGGGGAGTTTCTGAGAGCACTTCAAAGACGAGAAGCCGATATT
CATCAGCCAGCGACGCGAGGAGGTCCCATGGGCTGGCTGAACCCTAAAAACCGTTCTTCG
CTTCTGCAGATGCTGGGCTAGTAGAGTTTTTTATCGTTGCAAGATTTTTCTTCTTAAGCC
TTGGGTCAGGTACCATTTGAATGGTATTTCAGCCAAGTCTAGGTCACATAAGAATGATAA
GATTAGTTCATCCAGTCTTGTTATAGTATCCCGTTCTGTTGTTACTGCTCAGGACTGGGA
GTGAATTTTGCTGTAAATATCGTGTAGGTATAGCGGTTGATCCGGTTGTACATAGTGTCT
TTGGTGTGCTCTCTCAGAGTCTCAGTACATGGGTGAGGGTGATGTATTTTATCTGGTAAT
AGGATATAGGTGTTAAGTTTCAAACCTTGTCCATCTTATCTGTTCCATTTTTATGTATTT
ATAGACAGCATTTCATAATATGACAGCTGCAGCTTTGTCGATATTTATTTCT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_59944.3	1533	0.0	280 - 1533	100	1254 / 1254	CUST_1864_PI390587928 CUST_1863_PI390587928	ABC07147
MLOC_59944.6	1782	2e-87	252 - 427	100	176 / 176	CUST_1864_PI390587928 CUST_1863_PI390587928 CUST_1865_PI390587928	ABC07147
MLOC_59944.7	1666	2e-87	252 - 427	100	176 / 176	CUST_1864_PI390587928 CUST_1863_PI390587928 CUST_1865_PI390587928	ABC07147
MLOC_59944.5	2081	2e-87	275 - 450	100	176 / 176	CUST_1864_PI390587928 CUST_36466_PI390587928 CUST_1863_PI390587928 CUST_1865_PI390587928	ABC07147
MLOC_59944.4	1910	2e-87	280 - 455	100	176 / 176	CUST_1864_PI390587928 CUST_36466_PI390587928 CUST_1863_PI390587928	ABC07147
AK363848	2855	2e-87	1495 - 1670	100	176 / 176	CUST_1863_PI390587928 CUST_1865_PI390587928	ABC07147
MLOC_59944.2	1569	2e-87	305 - 480	100	176 / 176	CUST_1864_PI390587928 CUST_1863_PI390587928	ABC07147
MLOC_59944.1	1663	3e-75	1507 - 1663	99	157 / 158	CUST_36466_PI390587928 CUST_1863_PI390587928	ABC07147