barSeed - Barley Seed Development Database

Probe ABC06686

Source Contig ABC06686

barSeed

Links

Affymetrix Source Sequence (697 bp)

>ABC06686 697
CCACGAGGCTACAACATCCTCAAGGACGAGTCGTCGGAGGACGCGGCAGTGCTGGCCACC
GCGGGGGCGGCCGTGAGGAAGGTGGGGTACACGCGCTACATGAGCTCCAAGGCGACGAGG
GAAGGCGGCCTCGACGGCCTCATGAACGCCGAGGTCAAGGCCAAGCTCGGCATCATCCCC
AACAACTTCACCTGGGGAGAGCAGTCGGGCGACGTCTTCCAAGCCCTCGCAGGCGACTTC
ATGAAGCCAAGAATCAACGAGCTCGATCTCATCTGCGCAACCAAGGGAACACTGGACTGG
GTCCAGAAGCTCAAGTGGGAAGGCCTTAAGAACTTCACAGACTCGCCCAGAAAGCCGCTC
TACTGCAAGGCGGGTGAAGCAGCCGGCACCCAGGCCTTTCTCAAGTCGTACAAGAACCTG
AAATTCTACTGGATACTCGGAGCTGGCCACATGATACCGATCGACAACCCTTGCCCTGCA
CTCAAGATGCTGGGTGACATTACACATTCTCCTGCTCGGTAGAAAGAAGACGACGGCGAC
GCACCAAGCAGCCTGACACCAACACAAGAAATGATTCCTTTTTTTCCCTTTTTCTTTTCA
CAGTAAAAATGCTGGACGTTTATGAGATACGAAAGATGAGAAAAGAGAGATAAATGAATA
GAGAGACATCTGTTTGACTTTAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK251038.1	2460	3e-127	949 - 1201	99	251 / 253	CUST_23774_PI390587928 CUST_23775_PI390587928	ABC06685 ABC06686
MLOC_40224.2	577	1e-130	104 - 362	99	258 / 260	None	ABC06685 ABC06686
MLOC_40224.1	798	1e-130	331 - 583	100	253 / 253	None	ABC06685 ABC06686
MLOC_34741.1	734	9e-118	163 - 395	99	233 / 234	CUST_23774_PI390587928 CUST_23775_PI390587928	ABC06685 ABC06686
MLOC_15518.1	1006	7e-64	264 - 459	89	175 / 196	None	ABC06685 ABC06686
MLOC_18860.1	524	9e-98	138 - 331	100	194 / 194	None	ABC06685 ABC06686