barSeed - Barley Seed Development Database

Probe ABC06685

Source Contig ABC06685

barSeed

Links

Affymetrix Source Sequence (1656 bp)

>ABC06685 1656
GCTCCTGTCGTCGACGACGAGTCCCTGTCGACCACAATGGCAGCGGCGAGGTTGCTCCTG
CTGCCCGGCGTCGCTCTCGTCGCCCTCCTCCTCTTCCTGCCCTTCGGCGCCGCCGCCGCT
GGCACCGCCGATGGGTCAGAGGAGTGGGGATACGTGCAAGTCCGGCCGAAGGCGCACATG
TTCTGGTGGCTGTACCGTAGCCCCCACCGCGTCGACAACGACACAGCGCCATGGCCGACC
GTGCTGTGGCTGCAGGGCGGCCCGGGCGCTTCGGGGGTGGGTTACGGCAACTTCATGGAG
ATCGGGCCGCTGGACACGGAGCTCAAGCCCCGCGCCACCACCTGGCTCAACAAAGCCGAC
CTCCTCTTCGTCGACAACCCAGTGGGCACGGGGTTCAGCTTCGTGGAGGGCGGCAACAAG
AGCCTGATGGCGCAAACGGACGGGCAGGCGGCGCGCGACCTGACGGCGCTGCTCATCAAG
CTCTACCGGCACAAGAAGCTGCTGCAGGGGAGCCCGCTCTACATCGTGGCCGAGTCGTAC
GGCGGCAAGTTCGCCGCCACCACCGCCCTCGCCGCGCTCAGGGCCATCCGCCAGGGACAT
CTCAACGCCAAGCTTGGAGGCGTGGCCCTGGGGGATAGCTGGATTTCACCCGAGGACTCC
GTGTTGTCATGGGGCCCGTTACTGTACCAACTGTCCCGTATCGACGAGAAGGGACTGCGG
CAATGCGACAGCCTCGCGAAGCAGATCAAGGCGCAGCTCAAGGCGAAGCAGTACGGGGCG
GCCGAGAAGTCGTGGGAGGACCTCGAGTCGGCCGTGCTCGAGCACAGCAACTCCGTCAAC
TTCTACAACATCCTCAAGGACGAGTCGTCGGAGGACGCGGCAGTGCTGGCCACCGCGGGG
GCGGCCGTGAGGAAGGTGGGGTACACGCGCTACATGAGCTCCAAGGCGACGAGGGAAGGC
GGTCTCGACGGCCTCATGAACGCCGAGGTCAAGGCCAAGCTCGGCATCATCCCCAACAAC
TTCACCTGGGGAGAGCAGTCGGGCGACGTCTTCCAAGCCCTCGCAGGCGACTTCATGAAG
CCAAGAATCAACGAGGTTGACGAGCTCCTCAAATTTGGAGTGGAAGTGACCATATACAGC
GGACAGCTCGATCTCATCTGCGCAACCAAGGGAACACTGGACTGGGTCCAGAAGCTCAAG
TGGGAAGGCCTTAAGAACTTCACAGACTCGCCCAGAAAGCCGCTCTACTGCAAGGCGGGT
GAAGCAGCCGGCACCCAGGCCTTTCTCAAGTCGTACAAGAACCTGAAATTCTACTGGATA
CTCGGAGCTGGCCACATGATACCGATCGACAACCCTTGCCCTGCACTCAAGATGCTGGGT
GACATTACACATTCTCCTGCTCGGTAGAAAGAAGACGACGGCGACGCACCAAGCAGCCTG
ACACCAACACAAGAAATGATTCCTTTTTTTCCCTTTTTCTTTTCACAGTAAAAATGCTGG
ACGTTTATGAGATACGAAAGATGAGAAAAGAGAGATAAATGAATAGAGAGACATCTGTTT
GACTTTATAGCATACAGTACTGGTGCAACTATGTTACTTTTCGGGTGACAGGGTATAATC
AAAAATCAAAATTCACAGCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_15658.2	1035	0.0	4 - 734	100	731 / 731	None	ABC06685
AK251038.1	2460	0.0	769 - 1252	99	482 / 484	CUST_23774_PI390587928 CUST_23775_PI390587928	ABC06685 ABC06686
MLOC_15658.3	912	2e-83	634 - 802	100	169 / 169	None	ABC06685
MLOC_15518.1	1006	0.0	3 - 1003	85	879 / 1035	None	ABC06685 ABC06686
MLOC_15658.1	1105	8e-137	542 - 806	100	265 / 265	None	ABC06685
MLOC_40224.1	798	0.0	280 - 703	99	422 / 425	None	ABC06685 ABC06686
MLOC_653.1	640	0.0	4 - 566	91	511 / 563	None	ABC06685
MLOC_15658.4	395	0.0	1 - 389	100	389 / 389	None	ABC06685
MLOC_40224.2	577	0.0	108 - 482	99	373 / 376	None	ABC06685 ABC06686
MLOC_34741.1	734	6e-158	163 - 468	99	306 / 307	CUST_23774_PI390587928 CUST_23775_PI390587928	ABC06685 ABC06686
MLOC_18860.1	524	6e-98	137 - 331	100	195 / 195	None	ABC06685 ABC06686