barSeed - Barley Seed Development Database

Probe ABC06025

Source Contig ABC06025

barSeed

Links

Affymetrix Source Sequence (493 bp)

>ABC06025 493
ACTCAGATTGGCTTGCAGAAGCAACTTCATGCACAGCTTGAGCTCCAAAGAAAGATGCAG
CTGCAAGTAGAAGAACACAGCAAGTACCTGGAGATGGTGATCGCGAGGCAGGGCGAGAGC
CTAAAACAGCTCGGCGCACTACCGAGGTTCCAGCATTCAAGCACCCCGGCTGTGGATCAC
AAGGAAGCATACAGAGAACAAACGGCAGACACCGATTCGGCCGAAGGGAGCCATCCGGAA
AAGGAATAAATGCGGATAATTTACTCGGAATTGCAAACAAAAGGAGCCAGCTAGATCGGA
GACAAGAGTAGCTCAGAAAGTGAGGATCATAGCCTAATCTAATTTCCGTCTCGGTTGATC
TTTTTCATCATGCACTGTAATTATTGTGGGCTGACTTTGCTGCACAGATTTTTTGATTTG
GAACGCAGAACATTTCTTTCTTCATAGCAAAACTATCATCATACTGCAGTTTATGTAAAA
AAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_65278.2	1564	0.0	1070 - 1546	98	469 / 477	CUST_27296_PI390587928 CUST_27297_PI390587928	ABC06024 ABC06025 ABC06026 ABC26931
MLOC_65278.1	1553	0.0	1070 - 1506	98	430 / 437	CUST_27296_PI390587928 CUST_27297_PI390587928	ABC06024 ABC06025 ABC06026 ABC26931
MLOC_65278.3	1342	0.0	913 - 1342	98	423 / 430	CUST_27296_PI390587928 CUST_27297_PI390587928	ABC06024 ABC06025 ABC06026 ABC26931
MLOC_65277.1	944	7e-73	778 - 944	96	161 / 167	CUST_27296_PI390587928 CUST_27297_PI390587928	ABC06024 ABC06025 ABC06026 ABC26931
MLOC_65277.2	947	7e-73	781 - 947	96	161 / 167	CUST_27296_PI390587928 CUST_27297_PI390587928	ABC06024 ABC06025 ABC06026 ABC26931