barSeed - Barley Seed Development Database

Probe ABC06024

Source Contig ABC06024

barSeed

Links

Affymetrix Source Sequence (677 bp)

>ABC06024 677
GCCGGTGGCCCACACACACACACACACACACACACGGACACACCTGCGCCGGAGCTCAGA
CCTCAGGCGTTCCAATGGCGGGGGTCGCGTGCCCGGTCTACCCGTGGCCGACCGACGCCA
GGGCGCAGCGCGGGGCCAAGGTGTTCATGCAGAGGGACTGCGCCGCGTGCCACTCCGCGC
TCCCCTACGCCGGCCTCCGGGACGCGCCGGTGCTAGGCCAACTGGGACCCACTACGGCCG
AGATCCTCGTCGCCGCCGCCACGGCCACCGAGGAGGCGATGCCGCCGCCGGCGACGACGC
CGCTCCAGCACACGCCGGACCTCGCCACCGTCGTCACAAGGATCCAGGGCGGGCTGCGCT
GCAACCTCTACTCCACCGGGACGGCGGCGACGCCCGTCAGGGCGATGCTCGCCGACGGCG
CCGCGGTGGCGTGCCAGGAGCTCAAGAAGAGCCCCGTCTGGCTGCAGTTTGCCCAGGCTT
TCCAGGCAGCTTGATGGGATGAACCCAGTCTTCAGTGACACACGCCTTGCTCTGCCCAAT
CTCATCTCATTTCTGTCCAACAAGATGGTGTGTCTGTCAATGTCGCATATGTATAAATCA
CATCACATTGCACCTTGTGCTGGATCAAAATAAAGCACTCATGTGCAGCCGTTCCATGCT
AAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_65277.2	947	0.0	64 - 721	97	638 / 660	CUST_27296_PI390587928 CUST_27297_PI390587928	ABC06024 ABC06025 ABC06026 ABC26931
MLOC_65277.1	944	0.0	64 - 718	96	635 / 660	CUST_27296_PI390587928 CUST_27297_PI390587928	ABC06024 ABC06025 ABC06026 ABC26931
MLOC_65278.3	1342	0.0	298 - 853	96	536 / 558	CUST_27296_PI390587928 CUST_27297_PI390587928	ABC06024 ABC06025 ABC06026 ABC26931
MLOC_65278.2	1564	7e-114	359 - 581	100	223 / 223	CUST_27296_PI390587928 CUST_27297_PI390587928	ABC06024 ABC06025 ABC06026 ABC26931
MLOC_65278.1	1553	7e-114	359 - 581	100	223 / 223	CUST_27296_PI390587928 CUST_27297_PI390587928	ABC06024 ABC06025 ABC06026 ABC26931