- Probe ABC04970
- Source Contig ABC04970
Affymetrix Source Sequence (2236 bp)
>ABC04970 2236 GCACCATCTATCCTACCCCGTTGCCGCCGTGCCGGTGCCACACGACCACCACCGCCATTT CTGGTCAGGAGGCTCCTCCCCCCGCTCCTGCGCCGGCACAGGATGGCGCTGCTCACGGCC CCCGCGGTGTTCGCCGCGCTCCTGCTCTTCTGGGCCGTGCTCGGCGGCACGGACGCCGAC TACGTGCTCTACAAGGACGCCACCAAGCCCGTGGAGGACCGCGTCGCCGACCTCCTGGGG AGGATGACGCTGGCGGAGAAGATCGGGCAGATGACCCAGATCGAGCGGCTCGTGGCCACG CCGGACGTGCTCCGGGACAACTTCATCGGCAGCCTGCTCAGCGGCGGCGGCAGCGTGCCG CGCAAGGGGGCCACGGCCAAGGAGTGGCAGGACATGGTGGACGGCTTCCAGAAGGCCTGC ATGTCCACGCGGCTCGGCATCCCCATGATCTACGGCATCGACGCCGTCCACGGCCAGAAC AACGTCTACGGCGCCACTATCTTCCCCCACAACGTCGGCCTCGGCGCCACCCGGGACCCG TACCTCGTGAAGAGGATCGGCGAGGCCACCGCGCTCGAAGTCAGAGCCACCGGCATCCAG TACGCCTTCGCGCCTTGCATCGCGGTGTGCAGAGATCCGAGATGGGGGCGGTGCTATGAG AGCTACAGCGAGGATCGCCGGATCGTGCAGTCCATGACGGAGCTCATCCCCGGCCTGCAG GGCGACGTCCCCAAGGACTTCACCAGCGGCATGCCCTTCGTCGCCGGAAAGAACAAGGTG GCTGCATGCGCGAAGCATTTTGTGGGCGACGGCGGCACGGTGGACGGCATCAACGAGAAC AACACCATCATCAACCGTGAGGGCCTGATGAACATCCACATGCCGGCGTACAAGAACGCC ATGGACAAGGGCGTCTCCACCGTCATGATCTCCTACTCCAGCTGGAACGGGGTCAAGATG CACGCCAACCAAGACCTCGTCACCGGATACCTCAAGGACACGCTCAAATTCAAGGGCTTC GTGATCTCAGACTGGGAGGGCATTGACAGGATCACCACCCCTGCCGGATCTGACTACTCC TACTCGGTCAAGGCTTCCATTCTTGCCGGCCTTGACATGATCATGGTGCCGAACAACTAC CAGCAGTTCATCAGCATCCTGACCGGCCATGTCAACGGCGGCGTCATCCCCATGAGCAGG ATCGACGATGCCGTGACCCGGATCCTGCGGGTCAAGTTCACCATGGGTCTCTTCGAGAAC CCCTACGCTGACCCTGCCATGGCCGAGCAGCTAGGAAAGCAGGAGCACAGGGATTTGGCG AGGGAGGCGGCGAGGAAGTCGCTGGTGCTGCTGAAGAACGGCAAGACTTCGACCGACGCG CCGCTTCTGCCGCTGCCCAAGAAGGCGCCCAAGATCCTGGTCGCCGGGAGCCACGCCGAC AACCTGGGCTACCAGTGCGGCGGCTGGACCATCGAGTGGCAGGGCGACACGGGCCGCACC ACCGTGGGCACCACCATCCTGGAGGCGGTGAAGGCGGCCGTGGACCCGTCGACGGTCGTG GTGTTCGCCGAGAACCCCGACGCGGAGTTCGTCAAGAGCGGCGGCTTCTCCTACGCCATC GTTGCCGTGGGCGAGCACCCGTACACGGAGACCAAGGGCGACAACCTGAACCTGACCATC CCGGAGCCCGGCCTGAGCACCGTGCAGGCGGTGTGCGGCGGCGTGCGGTGCGCGACGGTG CTCATCAGCGGGCGGCCCGTGGTGGTGCAGCCGCTGCTGGCCGCCTCCGACGCGCTGGTG GCGGCGTGGCTCCCCGGCTCGGAGGGGCAGGGAGTCACCGACGCGCTGTTCGGCGACTTC GGGTTCACCGGGAGGCTGCCGCGGACGTGGTTCAAGTCGGTGGACCAGCTGCCGATGAAC GTCGGCGACGCGCACTACGACCCGCTCTTCCGGCTCGGATACGGCCTCACCACCAACGCG ACGAAGAAGTACTAGGTTATTATACTAGACAGCATAATGGAGATAGGAAAACTGGGGACA TGAACCGTAGGTTCTTGCTTCCCGCCATGGCTGCCGATCGATTTATTTCGCTCTCGGCCG ATATTTCTTACTGTTGCTTACTACTGCTATTCTTTCTTACTGTTGCTGGTTGATCTGGTG TATTCAGTGAGATCTCACTCTGCAAGCAGTATATATCCAATTGACGAGCTATTTTATTCA AAAAAAAAAAAAAAAA
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| AK374484 | 2384 | 0.0 | 225 - 2384 | 99 | 2155 / 2160 | CUST_4677_PI390587928 CUST_184_PI415269222 | ABC03391 ABC04970 ABC39160 |
| AK364842 | 2295 | 0.0 | 136 - 2292 | 99 | 2152 / 2157 | CUST_4677_PI390587928 CUST_184_PI415269222 | ABC03391 ABC04970 ABC39160 |
| MLOC_67725.1 | 2311 | 0.0 | 257 - 2094 | 91 | 1673 / 1845 | None | ABC03391 ABC04970 ABC39160 |
| MLOC_39594.1 | 1200 | 0.0 | 92 - 1018 | 99 | 924 / 927 | CUST_184_PI415269222 CUST_4677_PI390587928 | ABC03391 ABC04970 ABC39160 |
| MLOC_67725.2 | 1636 | 0.0 | 365 - 1350 | 91 | 900 / 989 | None | ABC04970 |
| AK250051.1 | 2180 | 5e-150 | 510 - 2045 | 73 | 1139 / 1555 | CUST_8083_PI390587928 CUST_8084_PI390587928 CUST_25234_PI390587928 CUST_8082_PI390587928 | ABC03391 ABC04970 ABC39054 ABC39160 |
| AK251544.1 | 2302 | 5e-150 | 632 - 2167 | 73 | 1139 / 1555 | CUST_8084_PI390587928 CUST_8083_PI390587928 CUST_25234_PI390587928 CUST_8082_PI390587928 | ABC03391 ABC04970 ABC39054 ABC39160 |
| MLOC_54387.1 | 248 | 3e-127 | 1 - 248 | 100 | 248 / 248 | None | ABC04970 |
| MLOC_75585.1 | 1644 | 4e-126 | 191 - 1641 | 73 | 1073 / 1475 | None | ABC03391 ABC04970 ABC39160 |
| MLOC_165.1 | 989 | 7e-99 | 135 - 925 | 75 | 605 / 803 | None | ABC03391 ABC04970 ABC39054 ABC39160 |
| MLOC_75585.2 | 795 | 9e-88 | 56 - 709 | 76 | 505 / 664 | None | ABC03391 ABC04970 ABC39160 |
| MLOC_75585.3 | 1611 | 9e-88 | 68 - 721 | 76 | 506 / 665 | None | ABC03391 ABC04970 ABC39160 |
| MLOC_72649.1 | 504 | 1e-76 | 79 - 495 | 80 | 338 / 425 | None | ABC04970 |
| MLOC_78371.1 | 832 | 5e-70 | 111 - 627 | 77 | 405 / 529 | None | ABC04970 |
| MLOC_25725.1 | 216 | 1e-66 | 51 - 198 | 98 | 145 / 148 | None | ABC04970 |