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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_184_PI415269222Hv_44K_v2CAGTGAGATCTCACTCTGCAAGCAGTATATATCCAATTGACGAGCTATTTTATTCCCTCC2178GeneList: turquoise
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.8642.1481.9080.7750.1870.187
Raw 2887.1715065.5303913.0832546.329209.140232.658



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36484222959e-222237 - 229110055 / 55plus ABC03391 ABC04970 ABC39160
MLOCAK37448423849e-222330 - 238410055 / 55plus ABC03391 ABC04970 ABC39160
MLOCMLOC_39594.112009e-22963 - 101710055 / 55plus ABC03391 ABC04970 ABC39160
JLOC1JLOC1_25823.111755e-22971 - 102510055 / 55plus
Harvest21ABC0497022362e-222165 - 221910055 / 55plusABC04970
Harvest35U35_175822362e-222165 - 221910055 / 55plus



Contig Sequence (2238 bp)

>TA34155_4513 2238 Hv_44K_v2
CGTCCGCGTAGCTACCACCATCTATCCTACCCCGTTGCCGCCGTGCCGGTGCCACACGAC
CACCACCGCCATTTCTGGTCAGGAGGCTCCTCCCCCCGCTCCTGCGCCGGCACAGGATGG
CGCTGCTCACGGCCCCCGCGGTGTTCGCCGCGCTCCTGCTCTTCTGGGCCGTGCTCGGCG
GCACGGACGCCGACTACGTGCTCTACAAGGACGCCACCAAGCCCGTGGAGGACCGCGTCG
CCGACCTCCTGGGGAGGATGACGCTGGCGGAGAAGATCGGGCAGATGACCCAGATCGAGC
GGCTCGTGGCCACGCCGGACGTGCTCCGGGACAACTTCATCGGCAGCCTGCTCAGCGGCG
GCGGCAGCGTGCCGCGCAAGGGGGCCACGGCCAAGGAGTGGCAGGACATGGTGGACGGCT
TCCAGAAGGCCTGCATGTCCACGCGGCTCGGCATCCCCATGATCTACGGCATCGACGCCG
TCCACGGCCAGAACAACGTCTACGGCGCCACTATCTTCCCCCACAACGTCGGCCTCGGCG
CCACCCGGGACCCGTACCTCGTGAAGAGGATCGGCGAGGCCACCGCGCTCGAAGTCAGAG
CCACCGGCATCCAGTACGCCTTCGCGCCTTGCATCGCGGTGTGCAGAGATCCGAGATGGG
GGCGGTGCTATGAGAGCTACAGCGAGGATCGCCGGATCGTGCAGTCCATGACGGAGCTCA
TCCCCGGCCTGCAGGGCGACGTCCCCAAGGACTTCACCAGCGGCATGCCCTTCGTCGCCG
GAAAGAACAAGGTGGCTGCATGCGCGAAGCATTTTGTGGGCGACGGCGGCACGGTGGACG
GCATCAACGAGAACAACACCATCATCAACCGTGAGGGCCTGATGAACATCCACATGCCGG
CGTACAAGAACGCCATGGACAAGGGCGTCTCCACCGTCATGATCTCCTACTCCAGCTGGA
ACGGGGTCAAGATGCACGCCAACCAAGACCTCGTCACCGGATACCTCAAGGACACGCTCA
AATTCAAGGGCTTCGTGATCTCAGACTGGGAGGGCATTGACAGGATCACCACCCCTGCCG
GATCTGACTACTCCTACTCGGTCAAGGCTTCCATTCTTGCCGGCCTTGACATGATCATGG
TGCCGAACAACTACCAGCAGTTCATCAGCATCCTGACCGGCCATGTCAACGGCGGCGTCA
TCCCCATGAGCAGGATCGACGATGCCGTGACCCGGATCCTGCGGGTCAAGTTCACCATGG
GTCTCTTCGAGAACCCCTACGCTGACCCTGCCATGGCCGAGCAGCTAGGAAAGCAGGAGC
ACAGGGATTTGGCGAGGGAGGCGGCGAGGAAGTCGCTGGTGCTGCTGAAGAACGGCAAGA
CTTCGACCGACGCGCCGCTTCTGCCGCTGCCCAAGAAGGCGCCCAAGATCCTGGTCGCCG
GGAGCCACGCCGACAACCTGGGCTACCAGTGCGGCGGCTGGACCATCGAGTGGCAGGGCG
ACACGGGCCGCACCACCGTGGGCACCACCATCCTGGAGGCGGTGAAGGCGGCCGTGGACC
CGTCGACGGTCGTGGTGTTCGCCGAGAACCCCGACGCGGAGTTCGTCAAGAGCGGCGGCT
TCTCCTACGCCATCGTTGCCGTGGGCGAGCACCCGTACACGGAGACCAAGGGCGACAACC
TGAACCTGACCATCCCGGAGCCCGGCCTGAGCACCGTGCAGGCGGTGTGCGGCGGCGTGC
GGTGCGCGACGGTGCTCATCAGCGGGCGGCCCGTGGTGGTGCAGCCGCTGCTGGCCGCCT
CCGACGCGCTGGTGGCGGCGTGGCTCCCCGGCTCGGAGGGGCAGGGAGTCACCGACGCGC
TGTTCGGCGACTTCGGGTTCACCGGGAGGCTGCCGCGGACGTGGTTCAAGTCGGTGGACC
AGCTGCCGATGAACGTCGGCGACGCGCACTACGACCCGCTCTTCCGGCTCGGATACGGCC
TCACCACCAACGCGACGAAGAAGTACTAGGTTATTATACTAGACAGCATAATGGAGATAG
GAAAACTGGGGACATGAACCGTAGGTTCTTGCTTCCCGCCATGGCTGCCGATCGATTTAT
TTCGCTCTCGGCCGATATTTCTTACTGTTGCTTACTACTGCTATTCTTTCTTACTGTTGC
TGGTTGATCTGGTGTATTCAGTGAGATCTCACTCTGCAAGCAGTATATATCCAATTGACG
AGCTATTTTATTCCCTCC



Homology of Contig TA34155_4513 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os03g53860.46270.0protein|periplasmic beta-glucosidase precursor, putative, expressed
Brachypodium v1_2Bradi1g08550.26310.0
Arabidopsis v10AT5G20950.16240.0Glycosyl hydrolase family protein | chr5:7107609-7110775 REVERSE LENGTH=624