barSeed - Barley Seed Development Database

Probe ABC04810

Source Contig ABC04810

barSeed

Links

Affymetrix Source Sequence (766 bp)

>ABC04810 766
CCCGGACCTACGACCTCATTCATGCTGATTCAGTTTTCAGTCTGTACAAGGACAGGTAAA
CACAAGTTGCACTACTACTGTTTACACATTGATTGGTTTTCTTTGTTCTTGGCCAATTCA
AATGATGTAAGCTGTTTTCACCCGGTTACAGTCTGATAATTTTGAACTCGTGGTTTGCAA
GGTGTGAGATGGACACCATCCTGCTGGAGATGGACAGGATCCTGAGGCCGGAGGGCACGG
TGATCATCAGGGACGATGTGGACCTGCTAGTGAAGATAAAGAGCGTCGCGGACGGGATGA
GATGGAATAGCCAGATCGTGGACCACGAAGACGGTCCGCTCGTCCGGGAGAAGCTCCTCC
TTGTTGTGAAGACATACTGGACACTTGGGGACGAGAAACAATAGCGACGCCCCGAAATAA
AGCATGAGAAACTGAGAAAATTGACAGATACTGGGCAGATGTCACAACCGGCCTTCCTCT
CACTGTGTTCGCCCTGTGGTTTTGAAGTTTTATCTTGCTGGGTCATTCTTTTTGGTGAAA
ATAGTTAAACATAGTGGAGACATGCCCAAGTATATGACAGATTTTGACATGGGAAGGCCA
ACCAAACAGCCAAATGGGGCAANCAGNAATTTCATTATGTTTCTTGCTGTACAAAGGGTT
GGTCATGTATAAAAACCCCTCGGCTCTTCTGTCCTCCTTACTGAATCAGTCCCAAGAATA
TTAAGACTACTTCGGTGATCTGGCTCTTCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_43452.2	2006	0.0	1419 - 1990	98	561 / 572	CUST_36360_PI390587928 CUST_36012_PI390587928	ABC04810 ABC04811
AK364198	2381	0.0	1824 - 2381	98	546 / 558	CUST_36012_PI390587928	ABC04810 ABC04811
AK353629	2367	0.0	1948 - 2365	100	418 / 418	CUST_36012_PI390587928	ABC04810 ABC04811
AK375789	2239	1e-66	1870 - 2076	89	184 / 207	CUST_29690_PI390587928 CUST_14289_PI390587928	ABC04810 ABC04811
AK366843	2191	2e-64	1759 - 1961	89	180 / 203	CUST_14289_PI390587928 CUST_29690_PI390587928	ABC04810 ABC04811
MLOC_65736.2	1645	2e-64	252 - 454	89	180 / 203	CUST_29690_PI390587928 CUST_21222_PI390587928	ABC04810 ABC04811
MLOC_65736.1	1745	2e-64	258 - 460	89	180 / 203	CUST_29690_PI390587928 CUST_21222_PI390587928	ABC04810 ABC04811