barSeed - Barley Seed Development Database

Probe ABC04369

Source Contig ABC04369

barSeed

Links

Affymetrix Source Sequence (1461 bp)

>ABC04369 1461
GGCCCCTCCTTCCCCAGCACCCAGAGGACGGTTCGTGGCGGCGAGGGTGAGGGCGTCGGA
GAAGCTCGGCGTGAGGCTGGAGCGCAACCCGGCCGAGTCCCGCCTCTCGGAGCTCGGCGT
CCGCCAGTGGCCCAAGTGGGGGTGCGAGAAGAGCAAGTTCCCGTGGACCTACTCGGCCAA
GGAGACGTGCTACCTGCTGCAGGGGAAGGTGAAGGTGTACCCCAGAGTAGTCCGCCCAAA
TCGATCAAAAATCCCCGGCACCGTCCTCCCGGAAGCCACCGGCGGCGCCTAAACGCCGGT
GTCCCACGGAGCCCAATCCATCTCTCTTCGCCTGTTCGCGGTCCGTTGAAAGCGAAAGAG
GCCGTTAGGGTTTTGCCGGCGCCTCTCCGATGGCGGAAGATGCTGGTAGCCGGATTGACA
TAGCCAACCTCCTTTCCCTCAGCAAGGACCTCGTCGGGGTGCTCCGGGGCAGAAAGGACG
TCGAATCCCTCGCGCAGGCCTCCAACTTTGCACGGATGCTGCGCTCCGCCAGCCACTCCA
AGTCGGAGAACCTCGAGCGCCAAGTCAAAGAGTATCAGGAAAAAATAAACTCCTGCAAGG
AAAAGTTAGACAAGGTAAAAGCTGAAACAGTTACTGATGAAGAACTGAATATGGTACAAA
ATGAGATGGAGGAGAAACTGCAGGGAAAGCAACACCTTCGCCAAGACTTAAGAGCGGTGA
GTGATGAAGTTGATGACCTAGACCATCAAAGGACTTCTATAGAAGAAAGGAAGGATGCTG
TGAAGAAGAAGGAGAAAGACATGCTGAAGGCACAAAGTATGCTTTCCATGTTTGTGACGG
TTACAAAAACAATTCCAAATTTCGAAGATCAGGAGAAGATTTCTGGATATACTGTTGACA
AGAACATAAAGAAGCTAGATAATTTTGAATTTGAGAAGACAATGTCATCAGTTAAGATCT
GCGACAAGCTTTGGAAAATGATTTAGGGCCTGGTACCTGCAGATCATAGTCATTGTACAA
TAGCAGCAATTGCATTTGTAGACTGTTGTGCAAGGTAACCACCCACCAATTGGAAGAATG
CAACTCTCCCAGTTGCTTCAAATGACCTAGTTGTGTGGCATCCTGTTATTCATATCTTGG
CAAATAGACTAGCTCAGCTCTGTTGTTGGTCTGGATTTGATTTCCTGAAGTGGCATTTCA
CTCAATTTTAGTTTCAGAAGCCAAATCTGTATCAGCACTTGCTACTCCGTGCTGTACGTC
TTAGGCCTGTACGATGTGAAAAATGTAATGTTTGCCCGTTATTTTGTTTGGATGTTTTTG
TCACTTTTTCTTCATGTTGCTCACTTGTATGGTTTATAAAATAATGTTGAAATTATGTGA
TCATCATACATTGATGTGTGATATGTAAACTAACTGAAATATCATTTGCTCTGTTTGTTT
CAATAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK249311.1	1510	0.0	36 - 1479	99	1443 / 1444	CUST_13426_PI390587928	ABC04367 ABC04368 ABC04369
MLOC_66919.3	1313	0.0	73 - 1313	99	1241 / 1242	CUST_13426_PI390587928	ABC04369
MLOC_66919.1	1507	0.0	102 - 679	100	578 / 578	CUST_13426_PI390587928	ABC04369
AK249652.1	1424	0.0	3 - 595	99	593 / 594	None	ABC02453 ABC02454 ABC04367 ABC04368 ABC04369 ABC38848
AK359384	812	0.0	59 - 627	100	569 / 569	None	ABC04367 ABC04368 ABC04369
MLOC_66919.4	657	0.0	89 - 644	99	556 / 557	CUST_13426_PI390587928	ABC04369
MLOC_66919.2	1391	3e-70	913 - 1061	99	148 / 149	None	ABC04369
AK252007.1	552	2e-82	77 - 315	91	218 / 239	CUST_13428_PI390587928	ABC04367 ABC04368 ABC04369
AK359290	625	2e-82	77 - 315	91	218 / 239	CUST_13428_PI390587928 CUST_13427_PI390587928	ABC04367 ABC04368 ABC04369