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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_13428_PI390587928Hv_44K_v2GATGCTCGACTGAATCTCTTCTCTTGTCGTGGAATAAAAACGCCGGATTAGTGGAAAAAA302GeneList: darkolivegreen
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.4080.5270.7871.4701.5492.027
Raw 5075.06010286.49013646.82739950.80014569.72320701.767



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK252007.15529e-22467 - 52110055 / 55plus ABC04367 ABC04368 ABC04369
MLOCAK3592906259e-22467 - 52110055 / 55plus ABC04367 ABC04368 ABC04369
MLOCMLOC_51422.17689e-22381 - 43510055 / 55minus ABC04367 ABC04368
JLOC1JLOC1_32852.18395e-22442 - 49610055 / 55minus
Harvest21ABC043673733e-25303 - 36210060 / 60plusABC04367
Harvest21ABC043686792e-22506 - 56010055 / 55plusABC04368
Harvest35U35_16003733e-25303 - 36210060 / 60plus
Harvest35U35_16016812e-22506 - 56010055 / 55plus



Contig Sequence (373 bp)

>U35_1600 373 Hv_44K_v2
GGGGCGGCGAGGGTGAGGGCGTCGGCGGAGGCGATGGCGACGGAGAAGCTCGGCGTGAGG
GTGGAGCGCAACCCGGCTGAGTCCCGCCTCTCGGAGCTCGGCGTCCGCCAGTGGCCCAAG
TGGGGGTGCGAGAAGAGCAAGTTCCCGTGGACCTACTCGGCCAAGGAGACATGCTACCTG
CTGCAGGGGACCTGGTGGTGTTCCCCAAGGGGATGAGCTGCACCTGGGACGTCACCGAGG
CCGTCGACAAGCACTACAAGTTCGAGTAGCTCTAGATTGAGGTATTTGTAGCCGGATTGT
GTGATGCTCGACTGAATCTCTTCTCTTGTCGTGGAATAAAAACGCCGGATTAGTGGAAAA
AAAAAAAAAAAAA



Homology of Contig U35_1600 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None