barSeed - Barley Seed Development Database

Probe ABC04368

Source Contig ABC04368

barSeed

Links

Affymetrix Source Sequence (679 bp)

>ABC04368 679
GCTTCGCCGCCTAAAATCTGCACTACACTAGAGTACACCGGCCCAGAGGACTCATCTCAA
AGGAATGGCGAGCCCAATGGTGGCGGCTCCAATCCGCATCAACAGCCTCAGATACGCCCC
TCCTTCCCCAGCACCCAGAGGACGGTTCGTGGCGGCGAGGGTGAGGGCGTCGGCGGAGGC
GATGGCGACGGAGAAGCTCGGCGTGAGGGTGGAGCGCAACCCGGCTGAGTCCCGCCTCTC
GGAGCTCGGCGTCCGCCAGTGGCCCAAGTGGGGGTGCGAGAAGAGCAAGTTCCCGTGGAC
CTACTCGGCCAAGGAGACATGCTACCTGCTGCAGGGGAAGGTGAAGGTGTACCCGGACGG
CGAGGAGGGGTTCGTGGAGATCGCTGCCGGGGACCTGGTGGTGTTCCCCAAGGGGATGAG
CTGCACCTGGGACGTCACCGAGGCCGTCGACAAGCACTACAAGTTCGAGTAGCTCTAGAT
TGAGGTATTTGTAGCCGGATTGTGTGATGCTCGACTGAATCTCTTCTCTTGTCGTGGAAT
AAAAACGCCGGATTAGTGGATTGTGTTTGTCCAACCTTCTCTGTGGCGTGTTCATGGCTG
GGCTCCAGAGCTGGAAGCAAACAGTGTATCATCCGTCTTATGTTTCAGTGATCCCTTGCC
CTGCAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK359290	625	0.0	1 - 625	100	625 / 625	CUST_13427_PI390587928 CUST_13428_PI390587928	ABC04367 ABC04368 ABC04369
AK252007.1	552	0.0	1 - 535	99	534 / 535	CUST_13428_PI390587928	ABC04367 ABC04368 ABC04369
MLOC_51422.1	768	0.0	276 - 682	99	405 / 407	CUST_13427_PI390587928 CUST_13428_PI390587928	ABC04367 ABC04368
AK359384	812	9e-113	2 - 279	93	274 / 296	None	ABC04367 ABC04368 ABC04369
AK249311.1	1510	1e-101	2 - 256	92	252 / 273	CUST_13426_PI390587928	ABC04367 ABC04368 ABC04369
AK249652.1	1424	3e-78	1 - 180	96	174 / 181	None	ABC02453 ABC02454 ABC04367 ABC04368 ABC04369 ABC38848