barSeed - Barley Seed Development Database

Probe ABC04283

Source Contig ABC04283

barSeed

Links

Affymetrix Source Sequence (1816 bp)

>ABC04283 1816
CGAGCTCAACATGGAGGGCGCCTACAACAGGGCCATCTTTCCGTATGAAAACATCGTCAT
CACGAGCTACGATATCGGCGGCTTCTACGAGGAGGTAGTAGTCCGGTGCAAGCTGGACAT
CGTGACCGGGTGCATGGACCGGACCTCGCACATGTTCGACCCACTGGCCACCATCGGCGA
CGGCTCCTGCCCGCTGGACTCTGATTCGGAGGAGTGACCGGACCAGCTTTGACCGCTGCC
ACGGAGGCGGCTGTCGAAGCGAAGCCGCGGGATTCGGGCGCCGAATCTTCTCACGGCGAG
GTTCTTTGCGTGGAGCTGGAGGAAGAGACAAGCCATCAGCATGATCTGGGTGCTGAAGTT
GCCCCGAGTGAAGTCCCTGTTGCGGGATTGCAGAAGCAGGAAGTTCAGGCTACGGAAGCT
GTTGGAGTGAAGCAGCTTCATCTGGATGTGGGGGCTGCTGCTGCAGAAGTTACTGATGCA
GGACTGGAGGAGGAGGAGGAGGGAGCACAAGCTGCTGAAGTGATTCCGCGTGAATTGGCT
TCCGACACTCTGCCTGCAGATGTTCTTGACGCTGTACCTGGGAAGCAGGAGGAGCAAGTC
ATTGAAGCGAATCAGCACGAATCGGCTCCCGTTGCGGCTCCAAGAGTGATCCCCGATGCC
GCAGCAAAGGATGAGGAAATGAAACAAGAATCTGTCGAAGAAGTTGTTGTTCCACATGAA
GAAGTTCAGAATAAGGAGGAAGCTCAATGTGAGGCCGGCACGGTTGATCAGCAAGAAAAA
CTGGTCTCTAAGGAGGAGCTGGCTCTTAAGAAATCTGATGATCTAAATGTCAGCCAAGAA
GTCGTCCCTAATGACAAAGTGGTTGTTCAGTTACCGGAGGAGGAAACGACATTGCTAGGG
ATGCCGGAAGACGAGGCTAGAGCAAGCATGGAGTTTGAAGAGTGGGAAGGGATCGAGAGG
AGTGAAGTGGAGAAGAGATTTGGTGCAGCAGCAGCATTTGCAGCTAGTGACACTGGGACG
GCTGCTCTGTCGAAGCTGAATAGCGATGTGCAGCTGCAGCTGCAGGGACTTCTCAAGGTT
GCAGTTGATGGTCCCTGTTATGATGCTGCACAACCACTTACACTGAGACCTTCTTCTCGT
GCAAAATGGGTCTCTTGGCAAAAGCTAGGAAACATGCATCCTGAGATTGCTATGGAAAAA
TACATGAATCTTTTGTCAGAATTTGTTCCTGGATGGATGGGGGACAAAACCTCGAGCACA
GAGAAGCGCGAGGTTGACGTTGATTCTGAAGGGGCCCTTTTAACAATGACTGCTCATACA
AGCGACCCACAGATCAATCAAGGGAATGAAGGTAGTACTAGCATAGATGAAGGTCCACTA
ACAAATCCTCCTAACCCAGAAAAAGGGCAGAGTTCTGACATCCCTGCCGAATGAACGTAA
CGGTCATCAAGTATTTCTTGCATCGGTGATATCAGCGCATTGCTGAGATCGCTGCTGATG
CCTTCCTCATAAGATTAGATTTGTACAGTGTTTGTGGTTGTGCTAATATTAGTGCTGTAA
TGGGTGTTGGTATGTGTAATGTATATGACTGTATATATCCCACAACGACCGCCTGCTGCC
TGTATATCGGCCAGTATCAACCTTATCATCAGGTTTAGTTTGTAACAGTATCCGTGGTAA
GCGGTAATTGTATGTCATCTCGCTGTTTGGGACGAGAGATTAAGTGGTTGAAGAAACAAT
CCTACCCGTCTCGCACTGAAATCGTCTCATTTGTGGGACCGTGTAAATGCTTTCCTTCAT
AAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_62839.1	2274	0.0	764 - 2274	99	1510 / 1511	None	ABC04283
MLOC_62839.2	1271	0.0	348 - 1269	99	921 / 922	None	ABC04283
MLOC_62839.3	2613	0.0	2168 - 2565	99	398 / 399	None	ABC04283
AK248369.1	1057	2e-102	679 - 905	96	219 / 227	CUST_35755_PI390587928	ABC04282 ABC04283
MLOC_52219.4	1152	2e-102	20 - 246	96	219 / 227	None	ABC04282 ABC04283
MLOC_52219.5	1272	2e-102	20 - 246	96	219 / 227	CUST_35759_PI390587928	ABC04282 ABC04283
MLOC_52219.3	1001	2e-102	89 - 315	96	219 / 227	CUST_35759_PI390587928	ABC04282 ABC04283
MLOC_52219.1	1348	2e-102	168 - 394	96	219 / 227	CUST_35755_PI390587928	ABC04282 ABC04283
MLOC_52219.2	1468	2e-102	168 - 394	96	219 / 227	CUST_35759_PI390587928 CUST_35755_PI390587928	ABC04282 ABC04283