barSeed - Barley Seed Development Database

Probe ABC04282

Source Contig ABC04282

barSeed

Links

Affymetrix Source Sequence (1133 bp)

>ABC04282 1133
GGCGCGCTCTCGCCTATCCACGCTTATATATGGCGACTCCTGCAAGCGCGAGAAGCTAGC
TGATCTCTGAACTCAGGCATCCTCCACACCTGCAAAACCAAAGGATTTAAGTGAAGAAGC
AGGCAGAGATATCGCCGGAGGCACGCACGCGCGATGGCCACCATCTCTTCTTGCAGCCGC
CTGTGCGGCGGCGGCAGCACCGCCTTCCACCGTCGACGCAGCCGGCCTGCGCGGGCCACC
GTCGTCACCTGCCGGAGATTCTCGGCCGTCGTCCGCGCGGCCGCCTCTGCCACCGCAGCG
GCGCCCGCGTCCACCGTGCCTCAAACCAAGGAGTGCAAGCTTCCGACGTGGGCGGAGTTC
GAGCTGGGGAAGTCGCCGGTGTACTGGAAGACCACCAACGGTCTTCCTCCAGCCCCGGGA
GAGGGCCTGAAGATATTCTACAACCCAGGGACGACCAAGCTGACACCCAACGAGCAGTTC
GGCATCGCCTTCAACGGGGGCTTTAACCAGCCCATCATGTGCGGCGGCGAGCCGAGGCAG
ATGACGCTGCAAGAGAGGGGGAAAGCCTGCCCCCCCATCTACACCATCAGGATACGGGTG
CCGCAGCATGCCATGACACTGGTTTTCTCCTTCACCAACGGAAGCGAATGGGACGGGGCT
TACACCCTCAAATTCAAGGTCCCCAAACCATGGCTCAACAAGCCTCTGAGCTTCTTCAAC
GAGGGGCTGGCTGACGAGCTCAACATGGAGGGCGCCTGCGACAGGGCCATCTTTCCGGAT
GAAAACATCGTCATCACGAGCTGCGATATCGGCGGCTTCTACGAGGAGGGAGGAGACCGG
TGCAAGCTGGACATCGTGACCGGGTGCATGGACCGGACCTCGCACATGTTCGACCCACTG
GCCACCATCGACGACGGCTCCTGCCCGCTGGACTCTGATTCGGAGGAGTGACCGGACCAG
CGCCAAGATGACATGAGCAGCAGCTTCGCAATATGTACTTACTATAAAACAAAGAGGGGG
AGCCACGATTGCTCGATGTGTCCTCTTCTCTTTGTTTATACTTGTATAAAAATGGATTTG
TGATGCAATTAAAGGAAGAAGGATAGTACAATGCGCAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_52219.1	1348	0.0	12 - 1127	100	1116 / 1116	CUST_35755_PI390587928	ABC04282 ABC04283
AK248369.1	1057	0.0	2 - 1040	99	1039 / 1040	CUST_35755_PI390587928	ABC04282 ABC04283
MLOC_52219.4	1152	0.0	1 - 979	100	979 / 979	None	ABC04282 ABC04283
MLOC_52219.6	1007	0.0	1 - 854	100	854 / 854	None	ABC04282
MLOC_52219.2	1468	0.0	752 - 1247	100	496 / 496	CUST_35755_PI390587928 CUST_35759_PI390587928	ABC04282 ABC04283
MLOC_52219.3	1001	6e-62	872 - 1001	100	130 / 130	CUST_35759_PI390587928	ABC04282 ABC04283
MLOC_52219.5	1272	0.0	1 - 485	100	485 / 485	CUST_35759_PI390587928	ABC04282 ABC04283
MLOC_52218.1	490	1e-143	1 - 277	100	277 / 277	None	ABC04282