barSeed - Barley Seed Development Database

Probe ABC04260

Source Contig ABC04260

barSeed

Links

Affymetrix Source Sequence (1485 bp)

>ABC04260 1485
GTGATTTGTGAGCAGGAAATCGAAGTATACTCCAGCTAGGAGCCTAGGCGAAGAAGCAGA
GCGAGCAATCATCAATGGAGAAAGGCACGCCCGCGCTCGGTTGGGCCGCGAGAGACGAGT
CCGGTCTCCTCTCCCCCTACAGCTTCTCGAGAAGGGCCCGGAAGGACGAGGATGTGACGA
TCAAGGTGCTCTTCTGCGGGATCTGCCACACCGACCTCCACATCGCCAAGAACGAGTGGG
GCAACGCCCTCTACCCCATCGTTCCCGGGCATGAGATTGTGGGCGTCGTCACCGACGTCG
GCCCTGGCGTCAAGAGCTTCAAGGTCGGGGACACGGTGGGCGTGGGCTACTTCGTTGACT
CCTGCCGCTCGTGCGGCACCTGCAGCAAGGGGTACGAGAACTACTGCTCCACCCTCGTGC
TCACCTCCAACGGCGTGGACTACGACGGCGCCACCACCCAGGGGGGTTTCTCAGACGTGC
TCGTCGTCAACCAGGACTACGTCCTCCGCGTCCCGGAGAGCCTGTCTCTCGCCGGGGCGG
CGCCGTTGCTCTGCGCCGGCGTCACGGTGTACAGCCCGATGATGCAGTACGGCCTCAACG
CGCCGGGGAAGCACCTCGGAGTCGTCGGCCTCGGGGGTCTCGGCCACATGGCCGTCAAGT
TCGGCAAGGCGTTCGGGATGACCGTCACCGTGATCAGCTCGTCGCCGAGGAAGCGCGAGG
AGGCGCTCGAGCGCCTCGGCGCCGACGCGTTCTTGGTCAGCCAGGACGCCGAGCAAATGA
AGGCTGCGGCGGGGACGATGGACGGCATCATCGACACGGTGTCGGCGGGGCACCCGCTCG
TGCCACTGCTGGAGCTGATGAAGCCGATGGGGCAGATGGTGGTGGTCGGCGCGCCGAGCG
AGCCCCTGGCGCTGCCAGCCTACGCCATCATCGGAGGCGGCAAGCGCTTGGCCGGGAACG
GCGTGGGCAGCGTGCGCGACTGCCAGGCGATGCTGGACTTCGCGGGGAAGCACGGCATCA
CCGCGGACGTCGAGGTCGTCAAGATGGACTACGTCAACACGGCGGTCGAGCGGCTGGAGA
AGAACGACGTGAGGTACCGCTTCGTCATCGACGTCGCCGGCAGCCAGCTGGGCGCCGCCG
CTTAGTGCTCCGAGACGTAGACACGCAGCGGTCACCGGCCACGTGGGGTCGTGATACGTG
GTCTTGTTATTTCCATGGGTCGGTGTGTGTGTATTTCCAGAATTTTCTGGTGAAATAATT
GCTTCGCATGTTGTGTGTTCTGGCCATGTTCCACTCTAGAATGGCCCTGTTTGGATCTAT
GAGCTAGAGTTAGTTTGAGCTAGTTTGGGTTCAACTAGCCCTAAAGTATCCAAACATAAG
GGTTAGATTGGAGCTAGTTGCATCTAACCCATGCAAAAAAACTATCCACCCAAGAGGTGC
TAATTGGAGCTAGTTCTCATGAGGTTCATTAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_71136.2	1460	0.0	177 - 1460	100	1284 / 1284	CUST_30424_PI390587928 CUST_421_PI415269222	ABC04260 ABC13997 ABC43432 ABC49969
MLOC_71136.4	1508	1e-75	128 - 282	100	155 / 155	CUST_30424_PI390587928 CUST_421_PI415269222	ABC04260 ABC13997 ABC43432 ABC49969
MLOC_71136.1	827	0.0	34 - 827	100	794 / 794	CUST_30424_PI390587928	ABC04260 ABC13997
MLOC_63771.4	1532	0.0	220 - 1318	90	991 / 1099	CUST_30424_PI390587928	ABC04260 ABC13997 ABC43432 ABC49969
MLOC_63771.1	1554	0.0	249 - 1347	90	991 / 1099	CUST_30424_PI390587928	ABC04260 ABC13997 ABC43432 ABC49969
MLOC_63771.5	1587	0.0	403 - 1402	91	906 / 1000	CUST_30424_PI390587928	ABC04260 ABC13997 ABC43432 ABC49969
MLOC_63771.2	1582	0.0	283 - 1282	91	906 / 1000	CUST_30424_PI390587928	ABC04260 ABC13997 ABC43432 ABC49969
MLOC_65081.1	1713	0.0	287 - 1336	83	874 / 1052	CUST_34910_PI390587928	ABC04260 ABC13997
MLOC_65081.2	1587	0.0	515 - 1378	82	713 / 865	CUST_34910_PI390587928	ABC04260 ABC13997
MLOC_63771.3	649	0.0	60 - 649	88	519 / 590	CUST_30424_PI390587928	ABC04260 ABC13997
MLOC_71136.3	557	2e-161	168 - 476	100	309 / 309	CUST_421_PI415269222 CUST_30424_PI390587928	ABC04260
MLOC_65244.2	1301	2e-63	173 - 1133	72	698 / 972	CUST_10114_PI390587928	ABC04260 ABC07292 ABC19854
MLOC_65244.1	1389	2e-63	173 - 1133	72	698 / 972	CUST_25632_PI390587928 CUST_10114_PI390587928	ABC04260 ABC07292 ABC19854
MLOC_16971.1	1151	5e-54	1 - 132	96	127 / 132	CUST_41564_PI390587928 CUST_41880_PI390587928	ABC04260