barSeed - Barley Seed Development Database

Probe ABC07292

Source Contig ABC07292

barSeed

Links

Affymetrix Source Sequence (1394 bp)

>ABC07292 1394
GGCATCCAACTTCTAATCGCCTCACCACACAGAAAAGGCAAAAGGAAACAAAAACCTCAT
AGAATTTCCGGGGAGTTACTCTAGAGATTTCCGGCGGAACCTCGCGCCAGGATGGCACCC
ACGGCGACGGAGCCGGAGCAGAGCCAGCAGCACACGAAGAAGGCGGTGGGCCTGGCGGCG
CTCGACGCCTCCGGCCGCCTCTCCCCGCTCGCCATCACCCGAAGAAGCACCGGAGACGAC
GATGTCATGATAAAGATTCTGTACTGCGGGATCTGCCACTCTGACCTGCACAGCATCAAG
AACGACTGGAAGAACGCTAAGTACCCCATGATCCCTGGGCACGAGATCGCCGGCGAGGTC
ACCGAGGTCGGCAAGAACGTGACCAAGTTCAAGGCCGGCGACCGTGTCGGTGTCGGGTGC
ATGGTGAACTCGTGCCAGTCCTGCGAGAGCTGCGACAAGGGCTTCGAGAACCACTGCCCG
GGCATAATCTTCACCTACAACTCGGTCGACCGTGACGGCACTGTCACCCACGGCGGCTAC
TCCAGCATGGTGGTGGTGCACGAGCGTTTCGTGGTCCGGTTCCCGGACGCCATGCCGCTG
GACAAGGGCGCGCCCCTGCTGTGCGCCGGCATCACCGTGTACAGCCCCATGAAGTACCAC
GGGCTGAACGTTCCCGGGTTGCACCTTGGCGTGCTGGGACTGGGCGGACTGGGCCACGTC
GCCGTCAAGTTCGGCAAAGCCTTTGGGATGAAGGTGACGGTGATCAGCTCGTCGCCAGGG
AAGAAGCAGGAGGCCCTCGAGAGGCTTGGCGCTGACGCGTTCGTCGTCAGCAAGGACGCC
GACGAGATGAAGGCTGCGGTGAGCACCATGGATGGCATCATAAACACGGTGTCTGCAAAC
ATCCCCATGGCCCCTCTCCTCGGGCTACTCAAGCCCAACGGCAAGATGATCATGGTCGGC
CTCCCAGAGCAGCCTATCGAGGTCCCTCCCTTTGCTCTGGTTGCCAGGAACAAGACCCTG
GCCGGGAGCTGCATCGGCGGCATGAGGGACACCCAGGAGATGCTGGACCTCGCGGCGAAG
CACGGCGTGACGGCAGACATCGAGGTGATAAGCGCGGAGTACGTGAACACAGCGATGGAG
CGCCTTGCCAAGGCTGACGTCAGGTATCGATTCGTCATCGACATCGCCAACACCCTCGAC
AAGGCCGCCGCTGCAGCCACAACCGAGTGACCGCCGACGTAACTCTAAGCGCTGCTCGCG
GTCTACGTTGGTCTCTGGTTCTCTGCTGTTATCACATACTTTATCAGTAGTACTAGTAAC
ATTGAACAGTCGAAAATTATTGTCAGTGATGTACTCCCTCCGTTCCTAAATATAAGTNCT
TTAAGAGATTCACC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK360748	1754	0.0	13 - 1406	99	1390 / 1394	CUST_35988_PI390587928 CUST_36526_PI390587928	ABC07292 ABC19854 ABC35280 ABC49731
MLOC_80447.1	2342	0.0	1 - 1144	100	1144 / 1144	CUST_35988_PI390587928	ABC07292 ABC19854 ABC35280 ABC49731
MLOC_80447.2	2422	0.0	1 - 1143	100	1143 / 1143	CUST_35988_PI390587928	ABC07292 ABC19854 ABC35280 ABC49731
MLOC_66364.1	1894	0.0	301 - 1529	92	1136 / 1238	CUST_35988_PI390587928	ABC07292 ABC19854 ABC49731
MLOC_3734.1	1589	0.0	413 - 1498	91	986 / 1086	CUST_22581_PI390587928	ABC07292 ABC19854 ABC35280 ABC49731
MLOC_65244.2	1301	0.0	153 - 1212	87	925 / 1060	CUST_10114_PI390587928	ABC04260 ABC07292 ABC19854
MLOC_65244.1	1389	0.0	153 - 1145	87	868 / 993	CUST_25632_PI390587928 CUST_10114_PI390587928	ABC04260 ABC07292 ABC19854
AK353779	1566	2e-136	1034 - 1414	90	342 / 381	CUST_22581_PI390587928	ABC07292 ABC19854 ABC35280 ABC49731
MLOC_51824.1	739	4e-114	429 - 652	100	224 / 224	None	ABC07292