barSeed - Barley Seed Development Database

Probe ABC03898

Source Contig ABC03898

barSeed

Links

Affymetrix Source Sequence (934 bp)

>ABC03898 934
GTCCTCCCGTCGTCTCCACCAAAGCAAAGCAGAGGAGTAGGAATCCCGGTTGAAGGATGA
CGACGGCGGCGCGGCCGACGTGGGCGCCGGCCAAGGGCGGGAACGAGCAGGGGGGCACCC
GCATCTTCGGGCCCTCCGGGAAGTACTCCTCCCGCGACCTCGCCGCCCACACCTCCCTCA
AGCCCAGAAAAGAGGGCCAACAAACTCAAGAAGAGGTACAAAAGAGGAATCTCAGGGACG
AACTTGAGGAGCGTGAACGCAAGCACTTCTCATCCAAGGATAAGTCCTATGTTGATGAGA
GGGACCGGCGAAAAAGTTCGAGCTTGCTCTTAGAAGGTTCAAAACGGGATGAGGATAAGA
TAGTTCCACGTGAAATTGATGCAGACGACTCTGACGTGGAGCTCAAAAGTGATGATGAAA
GCGACGATGATGATGACGACGATGACACCGAGGCACTAATGGCAGAGCTCGAAAGAATTA
AAAAAGAAAGAGCTGAGGACAGGCTTAGAAAGGAGCGTCAGCAAGCAGAAGAAGAGGCCA
AGATGAAGGAGGCTGAGCTGATGCGAGGAAACCCATTGATTAATATGAATAACTCTGGCT
CCTTCAATGTGAAGAGAAGGTGGGATGATGATGTTGTATTCAAGAACCAAGCTCGTGGAG
AGACTAAGACACCGAAACGGTTCATCAACGACACCATCAGAAGTGATTTCCACCGCAAGT
TTCTGCATAGGTACATGAAATGATGCTGCGGTACACTTTATGTTGCCTGGGCAGTATGCA
TGCTGGAAGAGCCTGTGATGTTTCATATTCTGAAGATCGATTTGTATGACATAACTGTAA
CATCCATGTTACCTGTATGGTGATATGTTTACCTTGTTCCTAAGAGTAAAGAAAAGAACC
CACTGCTTGTGTTTAAAAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK250213.1	1079	0.0	19 - 932	100	914 / 914	CUST_36881_PI390587928	ABC03898 ABC03899 ABC12988
AK362881	967	0.0	53 - 908	94	809 / 857	None	ABC03898 ABC03899
AK252947.1	993	0.0	128 - 973	94	800 / 847	None	ABC03898 ABC03899
MLOC_6915.1	2541	0.0	1831 - 2541	99	707 / 711	CUST_36881_PI390587928	ABC03898 ABC03899
MLOC_16543.2	777	0.0	1 - 777	94	734 / 778	None	ABC03898 ABC03899
MLOC_16543.1	645	0.0	23 - 645	96	597 / 623	None	ABC03898 ABC03899
MLOC_73125.3	347	3e-93	129 - 314	100	186 / 186	None	ABC03898 ABC03899 ABC12988
MLOC_73125.1	577	3e-93	132 - 317	100	186 / 186	None	ABC03898 ABC03899 ABC12988
MLOC_73125.2	991	3e-93	132 - 317	100	186 / 186	None	ABC03898 ABC03899 ABC12988
MLOC_26626.1	495	2e-66	161 - 351	91	176 / 193	None	ABC03898 ABC12988 ABC12989