barSeed - Barley Seed Development Database

Probe ABC03785

Source Contig ABC03785

barSeed

Links

Affymetrix Source Sequence (1016 bp)

>ABC03785 1016
GGTGGAATGTACCGTCAGATGGAAAGTACAAGTTCAGAGGAAATACCTATGGATCACACC
GTTTCGGTAATGAGAACATAGATGGCTTGAATGAGCTGAAGAGAGGGCCAAGAAGCACTG
TCATTAAAAATGAACAGGGTGCTGGAGAAGCTGCTGTTGCACCTGCGAAAGGACAGGAGC
TTCCTACTGGTGATGCCTCAAATGCAGTTGTGCAGGATCAGTACAATAAGGCTGACTTTG
TTGAAACTTACTCAGATGCCAAGTTCTTCATTATAAAATCATACAGCGAGGATGATGTTC
ACAAGAGCATCAAGTACAATGTTTGGGCAAGCACCCCCAGCGGAAATAAAAGGCTTGATG
CTGCTTATCAAGCAGCTAAAGACAAATCAAGCAATTCACCTATATTTCTGTTGTTCTCTG
TCAACACCAGCGGTCAGTTCATTGGACTTGCCGAGATGGTTGGCCAGGTTGATTTTAACA
AGACAGTTGAATACTGGCAGCAAGACAAGTGGACTGGCTGCTTCCCCGTCAAGTGGCACA
TTGTAAAGGACATTCCCAACACTCTACTGAAGCACATTATTCTTGAGTATAACGAAAACA
AACCAGTGACGAACAGCAGAGATACCCAGGAGGTTAGGCTTGAGCAAGGGCTTCAGGTGC
TAAAGATTTTCAAGGATCATGTCTGCAAGACATCCATGTTGGATGACTTTGGCTTTTATG
ATAACCGTGAGAAGATAATGCAAGAGAAGAAATCCAAGCGACAGCAGCAGCCACTGGAGA
AGATCATGAGCAAAAAGCCGCTTTCTATCAACAACACTGAAAACCAAGATGTCGATGAGA
AGCAGGGGATCATGAACAAAAAGCCGCTTTCTACCAGCGACACTGAAAATCAAGATGCTG
ATGCAAAGCAGGGGCTGCAGGAGCTCAAGGTCCTAGGAGAGAAAAACCCTGTGGTGGAAA
ATGGTGTGGCGGCAGGGGCTGTGAATGGTGTTGCCCCAACAGACGCAAGCCCGGCA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK376464	2451	0.0	1020 - 2035	100	1016 / 1016	CUST_36684_PI390587928	ABC03785 ABC03786
MLOC_68496.2	1603	0.0	1 - 502	99	500 / 502	CUST_36684_PI390587928	ABC03785 ABC03786
MLOC_68496.1	1758	0.0	1 - 502	99	500 / 502	CUST_36684_PI390587928	ABC03785 ABC03786
MLOC_68497.3	2205	0.0	422 - 1193	82	641 / 784	None	ABC03785 ABC03786 ABC43785
MLOC_68497.2	2400	0.0	506 - 1277	82	641 / 784	None	ABC03785 ABC03786 ABC43785
MLOC_68497.1	2597	0.0	696 - 1467	82	641 / 784	CUST_36871_PI390587928	ABC03785 ABC03786 ABC43785
MLOC_50309.1	537	1e-102	146 - 381	95	225 / 236	None	ABC03785
MLOC_25191.1	158	1e-72	5 - 156	99	151 / 152	None	ABC03785