barSeed - Barley Seed Development Database

Probe ABC03354

Source Contig ABC03354

barSeed

Links

Affymetrix Source Sequence (743 bp)

>ABC03354 743
CAGCAACCACATAAAATTTCCGCCAAACCCACCACACACCCAGCAATGGCGTCCGCGCTC
ACCAACGTGAGCCTGTCTACCTTCGCGCCCACGGCCAGGGGCGACGTCCTCGCCAGGCCG
CAGGTGGCCGCCGCCGCCGCCCGGGTCACCTTCCCGACGGCGTACCGCGGCAGCGGCGCC
CTCTCCTGCAGGGCGGGCGGGCCGTCCACGCCGTCGGGCATCTCCGACAAGATGTCGGAG
AGCATCAAGGAGGCCCAGGAGACGTGCTCGGAGGACGCCGCTAGCGGGGAGTGCGCGGCG
GCGTGGGACGAGGTGGAGGAGCTCAGCGCAGCGGCCAGCCACGCCCGGGACAAGCTCAAG
GACTCCGACCCGCTCGAGAACTACTGCAAGGAGAACCCCGAGACCGACGAGTGCCGCACC
TACGACAGCTGAGCGTAGCTAATTTGTTGTGGACGTACGGCGGATACTCAAGGTGGACGT
GCGTGGTATTTCTTGGCTCGTGGGGGGCCGGGAAAACTATGTCGATCGACTCAGCCTACC
GTTACCTTGTATGTAGTAAAAATGCTCGAAATATTTTCCCAGGGACATACGTGTGGTTGA
TATACAATTGATGATACATATACGTTTATTCAAAGTTGTATTACGTATGTATGTGTGCAT
CGTTATGATGCAGAGACGAGAGCCAGATCGAACGCTGTTTTGGCCATCAGATCGCACTGC
ACGCANAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_65860.1	980	0.0	150 - 871	100	722 / 722	CUST_21005_PI390587928 CUST_21004_PI390587928	ABC03353 ABC03354
AK371825	732	0.0	16 - 732	97	696 / 717	CUST_21004_PI390587928	ABC03353 ABC03354
AK369627	401	2e-155	54 - 399	96	332 / 346	None	ABC03354
AK359305	818	4e-52	100 - 344	82	205 / 249	CUST_11677_PI390587928 CUST_21006_PI390587928	ABC03353 ABC03354
MLOC_75972.4	760	4e-52	248 - 492	82	205 / 249	CUST_21006_PI390587928	ABC03353 ABC03354