barSeed - Barley Seed Development Database

Probe ABC02976

Source Contig ABC02976

barSeed

Links

Affymetrix Source Sequence (1296 bp)

>ABC02976 1296
GCAGGCAATTCGCTTGTACGGAGCAGCAGAGTCTTGTACGTATAGTTGTAGATCATATAT
CCATCACGTACGTTCAGGGACAAACATGTCTCCGGTGAAGGTGTTCGGGCACCCGATGTT
GACAAACGTGGCACGGGTGATGCTCTTCCTGGAGGAGGTCGGCGCCGAGTACGAGCTCGT
GCCCGTGGACTTCGTCGCCGGCGAGCACAAGAGGCCCCAACACCTCCAGCTAAACCCGTT
CGGGCAGATGCCTGGGTTCCAAGATGGCGATCTCGTCCTGTTCGAGTCGCGCGCCATCGG
CAAGTACATCATCCGCAAGTACGGGACAGCCGGGCTGGACCTCCTCGGAGAAAACAGCGG
AATCGAAGAATCAGCAATGGTGGACATGTGGACGGAGGTGGAGGACCAGCAGTACTACCC
GGCCATCTCGCCCGTGGTGTTCGAGTGCATCATCAATCCCTTCATCATGGGTGGCGCGGC
GACGAACCAGAAGGTGGTCGACAAGAGCCTGGAGAGGCTCAAGGGTGTGCTGGGGATCTA
CGAGGCCCGGCTGGAGAAGAGCAGGTACTTGGCCGGGGACTCCATCAGCTTCGCCGATCT
CAACCACATCCCATTCACCTTCTACTTCATGACCACCCGGCACGCGTCGGTGTTTGATGA
CTACCCCAAGGTGAAGGCCTGGTGGGAGAGCCTCATGGCCAGGCCGGCGGTGCAGAGGGT
CTGCAAGCATATGCCTAGCCAGTTTAGCTGCCTACTAACCACTACGCCCTCCATAAACTA
AACTAATATGAAAGCTTTTACATCACCATAACTATTTTAGTGTAGTGATCTAAACACTTT
TATATTAGTTTATAGAGGGAGCAGATGTTTATGAGCGCGGGTGTGTGCGTGTGTGCCGGT
GATGATTCCGTTTAAGAGAAAGAGACATCGATCCCGTGGGTCATCATCAGCACTAGCCCG
CTTGCGCTTCTGTTGGTGCGAGCGAGCCTGATTGTGATTGATGTACCTACTTGGATTCCT
TGCTTTGTGCACTAGTATCGGTAAATAAACAACTCGTCAATGCTAATCCGTACGTAATAG
TACATCACTAGAGATCAGAATGGATCCAAAGTCAAAGCAACTATATATATATATACACAG
GGGTCTTGGATTGCATACGCACGTGTGCATGGCTCTCTGGCCGTGAAATCGCCGATTTCA
AGAAATTTTGTATTGTAATGCTCCAGATTTCAAGAAATTTTGTGAAGATTACTAACGCCT
GGCCCCTCTTATCAATACTATCGCTTATTTGCCGTC

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_49314.1	1385	1e-128	1 - 287	96	278 / 291	CUST_27678_PI390587928 CUST_27677_PI390587928	ABC01597 ABC02975 ABC02976
MLOC_49314.2	913	6e-122	1 - 275	95	266 / 279	CUST_27677_PI390587928	ABC01597 ABC02975 ABC02976
MLOC_18718.1	1026	2e-92	72 - 697	77	490 / 638	CUST_5075_PI390587928 CUST_5076_PI390587928	ABC01589 ABC01597 ABC02975 ABC02976 ABC40307