barSeed - Barley Seed Development Database

Probe ABC01597

Source Contig ABC01597

barSeed

Links

Affymetrix Source Sequence (932 bp)

>ABC01597 932
CCGATCTCTCGCTCTCTCGCGTGTAGCAACCAAGGGAATAGATGGCGCCGGTGAAGGTGT
TTTTTCCGGCCATGTCGACGAACGTGGCCCGGGTGCTGGTGTGCCTGGAGGAGGTCGGCG
CCGAGTACGAGGTCGTCGACATCGATTTCAAGGCCATGGAGCACAAGAGCCCCGAGCATC
TCGTCAGAAACTTTTTTTGCCAGATCCCTGCCTTTCAGGATGGAGATCTGCTTCTTTTTT
AGTCACGCGCAATTGCGAAGTACGTGCTGCGCAAGTACAAGACGGACGAGGTCGACCTTC
TAAGAGAAGGCAACCTGAAGGAAGCAGCCATGGTGGACGTATGGACGGAGGTGGACGCGC
ACACCTACAACCCGGCGCTGTCGCCGATCGTGTACGAGTGCCTCATCAACCCGCTCATGC
GCGGCCTGCCGACCAACCAGACGGTGGTGGACGAGAGCCTGGAGAAGCTCAAGAAGGTGC
TGGAGGTCTACGAGGCGCGCCTCTCCCAGCACAAGTACCTCGCCGGGGACTTCGTCAGCT
TCGCGGACCTCAACCACTTCCCCTACACCTTCTACTTCATGGCCACGCCGCACGCCGCGC
TCTTCGACTCGTACCCGCACGTCAAGGCATGGTGGGAGAGCCTCATGGCCAGGCCGGCCA
TCAAGAAGCTCGCCGCTCGGAGGGTTCCCAAGAACCCCTCCTCTGCTTAGGAGGGGTTTC
GCGTCCGAGGATAAGATAAAATATGTATGGCGTTTTCTTGTTGGTGTCGCGAATAAGGCA
ATGAATAAGCTTGCGCGGCTGGGATTGCACCAGCGTGCAGTTTTTGTGCTTGCCAATGTG
TGGTCGTGGGGAGCTCTTGAGATGGGACAATATCTTATAGCGCTTTCAGTTTTGTTGTTC
GTCAAGTCTTAGATTTGGTGTTTGTAGTCTTT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_18718.1	1026	0.0	40 - 972	97	903 / 933	CUST_5075_PI390587928 CUST_5076_PI390587928	ABC01589 ABC01597 ABC02975 ABC02976 ABC40307
MLOC_49314.1	1385	6e-71	432 - 1064	75	479 / 640	CUST_27677_PI390587928 CUST_27678_PI390587928	ABC01597 ABC02975 ABC02976
MLOC_49314.2	913	6e-56	420 - 883	76	354 / 468	CUST_27677_PI390587928	ABC01597 ABC02975 ABC02976