- Probe ABC02848
- Source Contig ABC02848
Affymetrix Source Sequence (4145 bp)
>ABC02848 4145 CAGCCCCGCTCCGCCGCGCCGCCCCGCTAGGGTTCCCCGCACCGCCGCCCGCCGCCCCGA CAGCCCACCCCGACGCCACCCAGAGTCGCACGCATACATACTACATCCGAGCCGACGCGC ACAGCCCCGGTCGCGGCCGGTGGTTCGCCGCCGACCGCCGCCTCACGCCCCTCGCGCCCA CCCACCTCACCGCGGCCCTCCCGTCTCGGCCCCGCCCGCGGTCCCTGGGCGCTGTTTCTC CAAGGTAACGTTCCTCCTGTTATCCGTGTTGTTTGATGCGGTTTAATGGCGAGTAATATG CAGACTCCTGGTCCGCCTCAGCCCCCCCGGCCTCCTATGATGGGTTCTACCGCACCACAA AATATGGGACAACCAATGCCCATGCAGTGGCCACCAGGTCCGCCACAACAGCCTCCTCAG TTCATGCAACCAGCGCCACAACAGTATCGACCTGTTGGTCAGGCCATGCCAGGAGTTAAC ATGGGCATGCCAGGGCAGATGCAACATTTTCAGCAACCTGGGCCACATATGCCTCATTCT GGTCATGTTCCGCCTGCATCACAAGCTGTTCCTATGCCATACCAGGCAGTTAGACCTATG TCATCAGCTCCTATGCAGCCACAGCAGCAAGCTGTATTCCCTGGTGGACATATGCCCACC ATGGGCACCCCTATGCCGCCTCCTTCATATACCTATCAACCAACAACGGTTCCTCCTGGA GCTCAACCCTGGGGTACAGTCCCAGGTCAGGGCGCACCTCTTGTGTCACCAATGGTGCAG CCTGGGCATCAGTCTCTCTCAGCTTCAGTGCCCCCAGTGAGCTCAACTGAACCTAGCTCT GCAGATTGGCAAGAACACAGTTCAGGGGATGGAAAGAAGTACTACTACAATAAGAGGACA AAGCAATCAAGTTGGGAGAAACCTGCTGAGTTGATGACACCTTTGGAGCGGGCTGACGCT TCAACCGAATGGAAAGAATTTACTACAGCAGAAGGACGGAAGTACTATTATAACAAAGTG ACAAAGCAATCCAAATGGTCTATTCCTGACGAGCTAAGGATCGCACGCGAATTAGCAGAA AAGACATCAAATCAACAGCCTGTCCGGGAAATTGAATCCACTACTGTTGCCCCTGTTGGA TCCACTTCTGTTTCTGTTGAGCCTTCTGTTTTACCTGCCAAGCAGTCTTCATCTTTAGTA GGAACAGTTGCTTCAAGCGCACATGATGCGACAGCAAACTTGCCTCCTCCTGGTGCTGCC CCGTCGTACAATGGGGATATACCTTCTTCTGGTTCCATGCAAAATGGTGGAACAAGTGCT GCTGTGGTTGTCCCTGTTACAACGAGCACTGGGGTTCCACAACTTGCAAGCGATGCTGGG ACAAACAGAAACACTTATGGAAGTTCATCTCTACCAAGTACTACTGACACAAAAGTTGGA GCATCTGCTGAGGATTTGGAGGAGGCCAAAAAGACGATGCCAACTGCAGGGAAGATCAAT GTTACTCCGCTGGAGGATAAAACAATTGAAGAAGAACCTGTTGTTTATGCTACTAAATTG GAAGCAAAGAATGCATTCAAGTCCCTGCTTGAATCGGCAAATGTCCAGTCTGATTGGTCA TGGGATCAGGCCATGAGAGTTATTATATCTGACAAAAGATATGGTGCTCTGAAAACTCTT GGAGAGAGAAAGCAAGCTTTCAATGAGTACTTAAACCAGCGGAAAAAGATTGAAGTTGAG GAGAGGCGTGTCAAGCAGAGGAAAGCACGTGATGATTTTCTCACAATGCTGGAAGAATGT AAGGACCTTACATCATCAATGAGATGGAGCAAAGCAATTACTATGTTTGGGCATGATGAA AGGTTCAATGCTGTTGAACGCCCCAAGGAGCGTGAAGATTTATTTGAGAACTATCTTGTG GAGCTACAAAAGAAGGAAAAAGCAAAGGCTGCTGAAGAGCACAAAAGGCGCATAGCAGAA TATAGAGAATTTCTTGAATCATGTGATTTCATCAAGGCAAACACCCAGTGGCGAAAAGTT CAAGATCGGCTAGAGGATGATGAACGCTACACCCGACTTGAAAAGATTGACCGCTTGGAT GTTTTCCAAGACTATATAAGGCATCTTGAGAAAGAAGAGGAAGAGCAGAAGAGAATTCAG AAGGAGCAATTAAGGAGACAAGAACGGAAAAACCGCGATGACTTTCGGAAGATGATGGAA GAACATGTTGCTGATTGTACACTTAATGCAAAAACTTACTGGCGTGACTACTGTTCACAG GTGAAGGATTCACGTGCTTACCTGGCAGTTGCTTCAAACTTGTCTGGCTCGATGCCAAAA GAACTCTTTGATGATGTCATGGAGGAGCTTGATAAACAGTATCAAGATGATAGGGCTTTA ATTAAAGATGAAGTGAAATCTGGAAAGATTCCTATGATGTCTTCATGGACATTAGAGGAC TTCCAAGCTGCTGTTACAGAGCATGAAAAATGTAAAGGAGTGTCGAAGATAAATATCAAG CTTATTTATGAGGACCTAATTGAAAGGCTCAAGGAAAAGGATCTAAAGGAGGCCAAGAAG CGTCAGCGACTGGGTGATAATTTTCTAGATCTACTGTACTCAATCAAGGAAATTACTGCT GCTTCAACATGGGATGATTCTAAATCACTATTTGATGATACACAGGAATACAGGGATCTG GGTGGTGAGACATATGCTAAAGAGCTTTTTGAAGAATATATTGTCCGCCTCAAAGAAAGG CTTAAAGAGAAAGAGCGCATGAGGGAGGAAGAGAAGGCAAAGAAAGAGAAAGACCGTGAA GAGAGAGAAAAGAAGAAGGAGAAGGAGAAGGAGAAGAAGGAGAAAGATCGCAAAGAAAAA GAAAGAGACCGAGAGAAGGAAAGAGAAAAGGAGAAAGGAAAGGACCGGTCAAGGAGAGAT GAAATGGATGTTGATGATGATGTGGAAATTCATGGCTCAAAAGACAAGAAACGAGAGAAG GATAAAGAAAAGAAGCATAAAAGGCGCCACCATGACACCACAGATTCTGAAAAGGATGAG AAGGATGACTCGAGGAAATCTCGAAGGCATAGCAGTGATCGCAAGAAATCTAGGAAGCAC ACCCATGCTTCAGACTCAGATAGTGAAAACCGCCATAGAAGACACAAAAGGGATCGAGAT AGTTCCCGCAAAAACGGTGCGCATGAGGAGCTTGAAGACGGTGAACTTGGAGAAGATGGG GAGATCCATTAGGCTTATGCTTTTACCTCCCAAGATTTGTCAGTACTTACCACCGTCCCT TTGTCATGTTCTCAATTGCTGCTATTATGTCTTATTCTGCTTATTAATAACTGACTAGTG GTATAATTACCGAAAATTAATGCTACTTTTTTTTGTCATTTTCTGGCATCAACTCCTTTC TGTAGTAGCATAAAATTGGTTGGCCTATACTCTTGACCTTGCTCTGGGGAGCTTTGTCGT CTAACTTGTGGTTTAGTGGTGGCCTATAGCTCTGACGGTTTACTGTATGTTTGCAATTTA CTGGTTTTATGCTTGCAGTTTGTTACTGACAATTTTGGGTGAGAAATCAGAGTTTGGGTA GTGGTGTCCTGATTGTAGGCAATATGGTTTCTGACCAAGCCAGTGATGGACAGTTCCATG CACCCTGTTGCCATTGATTCAGCATGGACATGGATGCCCGTAGCAGCAGTAACAACACCT GTTTGCAAGAGGGACAGCCGCCTGCAGCAGTTCATCATCTCAGTCAGTGCCCATATGAGA TATATGGTTTTTTCACAGCAATGAGTTAATTTGACAGTGCCGTAATGATGTGTACATGTG TATACATGAATGCATACTCTAGTCGTCTGATCTCTTCCCAGGATTTTTACCTGGGTAGGG ATGCAAGCGGGGCGCTACAACTGCCTGCTTCGGGTGTTCTGCTGGACAAATCAGTTGTAG TTTCTTTTTCGTGTCATTAGTACTATAGTTTATACTGTGATAACTGCTCAACTGGCTGTT GCTGGGGCACCTCTTGCATCCTAGTTTGAAGGGTAGATCCTGTGTGATGCTTGTAAGCTA GCTGGAAGATGGTTTCCTGTTGGTGAATCATCTTGTGCAGTTTATATATTTTGACCCGGT AAGGT
Probe Sequence's BLAST hits in Barley MLOC transcripts
| Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Agilent Probes on MLOCs | Affymetrix Probes on MLOCs |
|---|---|---|---|---|---|---|---|
| AK356860 | 3478 | 0.0 | 111 - 3477 | 99 | 3362 / 3370 | CUST_19392_PI390587928 | ABC02848 |
| MLOC_54106.2 | 3759 | 0.0 | 418 - 2972 | 99 | 2553 / 2555 | None | ABC02848 |
| MLOC_54106.1 | 3004 | 0.0 | 418 - 1105 | 99 | 687 / 688 | None | ABC02848 |
| MLOC_54106.4 | 3377 | 0.0 | 1 - 953 | 99 | 952 / 953 | None | ABC02848 |
| MLOC_54106.5 | 1588 | 0.0 | 1 - 1481 | 99 | 1480 / 1481 | None | ABC02848 |
| MLOC_54106.3 | 2653 | 0.0 | 1506 - 2651 | 99 | 1145 / 1146 | None | ABC02848 |
| MLOC_54105.2 | 1306 | 0.0 | 127 - 1306 | 99 | 1179 / 1196 | CUST_2568_PI390587928 | ABC02848 |
| MLOC_32027.1 | 999 | 0.0 | 46 - 675 | 97 | 612 / 631 | None | ABC02848 |
| AK372862 | 2178 | 3e-55 | 843 - 967 | 98 | 123 / 125 | CUST_2575_PI390587928 | ABC02848 ABC06491 ABC38385 |
| MLOC_54105.3 | 792 | 2e-171 | 465 - 792 | 100 | 328 / 328 | CUST_2568_PI390587928 | ABC02848 |
| MLOC_32027.2 | 785 | 7e-86 | 44 - 223 | 99 | 178 / 180 | None | ABC02848 |
| MLOC_54105.4 | 540 | 6e-107 | 1 - 212 | 100 | 212 / 212 | None | ABC02848 |
| MLOC_54105.1 | 520 | 2e-171 | 193 - 520 | 100 | 328 / 328 | None | ABC02848 |
| MLOC_43122.1 | 214 | 4e-93 | 1 - 193 | 99 | 191 / 193 | None | ABC02848 |
| MLOC_54105.5 | 414 | 6e-82 | 248 - 414 | 100 | 167 / 167 | None | ABC02848 |
| MLOC_32315.2 | 468 | 3e-80 | 287 - 468 | 97 | 176 / 182 | None | ABC02848 |
| AK251360.1 | 2010 | 1e-78 | 143 - 321 | 97 | 174 / 180 | CUST_36166_PI390587928 CUST_13539_PI390587928 | ABC02848 |
| MLOC_13996.1 | 152 | 8e-66 | 2 - 151 | 97 | 146 / 150 | None | ABC02848 |
| MLOC_32199.1 | 458 | 2e-61 | 314 - 455 | 97 | 138 / 142 | None | ABC02848 ABC02849 |