barSeed - Barley Seed Development Database

Probe ABC02789

Source Contig ABC02789

barSeed

Links

Affymetrix Source Sequence (1063 bp)

>ABC02789 1063
GGTTCACCACCGCTGCACGCACGCACGCACACTACCATCACAATTCACAAGTCCTCCATG
GCGCCATCTCGCGTTGTTAGCCTCCTGGCCGGTCTCCTCCTCGCCGCCCTCGCCGCAAGC
ACAGACGCGGCCACCATCACCGTCGTCAACCGGTGCTCCTACACGGTGTGGCCGGGCGCG
CTCCCAGGTGGCGGCGTGCGTCTCGACCCAGGCCAGTCGTGGGCTCTGAACATGCCGGCC
GGCACCGCGGGCGCCAGGGTGTGGCCGCGCACGGGGTGCACCTTCGACGGCAGCGGCCGT
GGCCGGTGCATCACCGGAGACTGCGGCGGCGCGCTGGCATGCCGCGTGTCCGGCCAGCAG
CCCACCACGTTGGCCGAGTACACCCTGGGACAGGGCGCGAACAAGGACTTCTTCGACCTG
TCCGTCATCGACGGGTTCAACGTTCCCATGAGCTTCGAGCCCGTCGGCGCGTCGTGCCGT
GCTGCGCGGTGTGCCACGGACATCACCAAGGAGTGCCTCAAGGAGCTGCAGGTGCCGGGA
GGGTGCGCGAGCGCGTGCGGCAAGTTCGGCGGCGACACCTACTGCTGCCGGGGCCAGTTC
GAGCACAACTGTCCGCCGACCAACTATTCGAAGTTCTTCAAGGGCAAGTGCCCCGACGCC
TATAGCTATGCCAAGGACGACCAGACCAGCACCTTCACCTGCCCTGCCGGAACAAACTAC
CAGATCGTCCTCTGCCCTTAAATTACGTCATCGGTATAATTACTGGGATCAATAAGGAAT
AAGGACTACTCTCAGTCCAGTTATGATCAGCAACCATGTGTATCAGCAACCATGTGTACT
AACATATATGCATGCATGACTAGTGCGTGTATGTCGATCGAGTTGTCGACCAATAATAAA
TAAATTGTTACGTAATTATATGTATGGCGAACTGAGCTAGTAGATGGTTAGTTTTCTTGT
GGTGGAAACAAACACAACGGGGTTCAAGTTCTTAGATTCGACACTAGTGACTGCATTTTT
CTAAATTTATTCCAGTCAATCCGACAATGTCCGTTTGGTAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK355059	1005	0.0	12 - 1005	99	989 / 994	None	ABC02787 ABC02788 ABC02789 ABC02790 ABC02792 ABC49421
MLOC_18451.1	890	0.0	92 - 890	99	798 / 799	CUST_38286_PI390587928	ABC02787 ABC02788 ABC02789 ABC02790 ABC02792 ABC49421
AK371265	921	0.0	83 - 834	92	699 / 759	CUST_38288_PI390587928	ABC02787 ABC02788 ABC02789 ABC02790 ABC49421
MLOC_75397.1	767	0.0	1 - 555	92	517 / 561	CUST_38288_PI390587928	ABC02787 ABC02788 ABC02789 ABC02790 ABC49421
AK355673	924	0.0	73 - 712	87	562 / 643	CUST_38252_PI390587928 CUST_38281_PI390587928	ABC02787 ABC02788 ABC02789 ABC02790 ABC02792 ABC39853 ABC49421
MLOC_2781.1	733	0.0	4 - 615	88	539 / 614	None	ABC02787 ABC02788 ABC02789 ABC02790 ABC02792 ABC49421
MLOC_28227.1	244	5e-107	1 - 220	99	217 / 220	None	ABC02787 ABC02788 ABC02789
MLOC_32484.1	209	1e-82	1 - 206	94	193 / 206	None	ABC02788 ABC02789 ABC02790 ABC02792 ABC39853 ABC49421