barSeed - Barley Seed Development Database

Probe ABC02792

Source Contig ABC02792

barSeed

Links

Affymetrix Source Sequence (840 bp)

>ABC02792 840
GCCGCTGCCACCGATGCGACCACCATAACCGTGGTGAACCGGTGCTCCTATACGATATGG
CCAGGCGCGCTCCCAGGCGGCGGCGCGCGTCTCGACCCGGGCCAGTCGTGGCAGCTCAAT
ATGCCTGCAGGCACGGCGGGCGCCAGGGTGTGGCCGCGCACGGGGTGCACCTTCGACCGC
AGCGGCCGTGGCCGGTGCATCACCGGCGACTGCGCGGGCGCTCTGGTCTGCCGCGTGTCC
GGCGAGCAGCCAGCCACGCTGGCCGAGTACACGCTGGGGCAGGGCGGGAACCGGGACTTT
TTCGACCTGTCCGTCATAGACGGGTTCAATGTGCCCATGAGCTTCCAGCCCGTCGGCGGC
GCACCGTGCCGCGCGGCTACCTGCGCCGTGGACATCACCCATGAGTGTCTGCCGGAGCTG
CAGGTGCCCGGAGGGTGCGCAAGCGCGTGCGGCAAGTTTGGCGGCGACACCTACTGCTGC
CGGGGCCAGTTCGAGCACAACTGCCCGCCAACCTACTACTCGAAGTTCTTCAAGGGCAAG
TGCCCCGACGCCTACAGCTACGCCAAGGACGACCAGACCAGCACCTTCACATGTCCCGCC
GGAACCAACTACCAGATCGTGCTCTGCCCTGCCCGAAATGATTTACACATGGATCAGTAA
GTAGAGAGGACTAGTCCTTGTAGTCTTCCTTACTTATTATGATCATCGATCGATCGTATC
AGTGTGTGCCATATGTCCATATATGCGTGCCTTCATGACGGGTGAGTGCATGTCATTCAG
CGAATAAATGTATAAATAAAAGGGACGTGTAATTTTTAAGGTTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK355673	924	0.0	84 - 903	98	807 / 824	CUST_38281_PI390587928 CUST_38252_PI390587928	ABC02787 ABC02788 ABC02789 ABC02790 ABC02792 ABC39853 ABC49421
MLOC_2781.1	733	0.0	1 - 620	98	606 / 620	None	ABC02787 ABC02788 ABC02789 ABC02790 ABC02792 ABC49421
AK355059	1005	0.0	130 - 748	88	547 / 622	None	ABC02787 ABC02788 ABC02789 ABC02790 ABC02792 ABC49421
MLOC_18451.1	890	8e-164	417 - 890	89	423 / 477	CUST_38286_PI390587928	ABC02787 ABC02788 ABC02789 ABC02790 ABC02792 ABC49421
MLOC_32483.1	250	5e-116	24 - 250	100	227 / 227	CUST_38281_PI390587928 CUST_38252_PI390587928	ABC02792 ABC39853 ABC49421
MLOC_32484.1	209	5e-106	1 - 209	100	209 / 209	None	ABC02788 ABC02789 ABC02790 ABC02792 ABC39853 ABC49421