barSeed - Barley Seed Development Database

Probe ABC02537

Source Contig ABC02537

barSeed

Links

Affymetrix Source Sequence (1208 bp)

>ABC02537 1208
TCCCTTTGCTTCCCCCCACCATCCTCCTCCCCCTCCACCGATCTGCACACGCCACCCACC
TTCCCCGGATCCCCCTCCGGCAGCGCTCCTCCCCCTTCTCCCTAATCCGCCGGAGCCCAG
CCGGCGCCCGCCATGAGCGCCTCCGAGTACGACTACCTCTTCAAGCTGCTCCTCATCGGC
GACTCCTCCGTCGGCAAGTCCTGCCTCCTCCTCCGCTTCGCCGACGATGCGTACGTCGAC
ACCTACATCAGCACCATCGGAGTTGATTTCAAAATCCGGACCGTCGAGCTCGACGGCAAG
TCGGTGAAGCTGCAGATTTGGGACACAGCAGGCCAGGAAAGGTTCAGGACAATAACGAGC
AGTTACTACCGGGGAGCGCATGGAATCATTATCGTATATGACGTGACAGATAGGGAAAGC
TTCAACAATGTCAAGCAGTGGTTGAGTGAGATTGATAGGTATGCCAGTGACAGTGTGTGC
AAGCTTCTAGTCGGGAACAAATGTGATTTGGTTGACAGTAAGGTCGTCGATACAGAGGAG
GCCAAGGCTTTTGCAGAATCATTAGGAATGAATTTCCTGGAGACAAGTGCAAAGGAGTCC
ATCAATGTGGAGACAGCTTTCTTAACCATGTCATCAGAAATCAAGAACAAGATGGCGAGC
CAACCTGCAGCGGAGCGGAAATCGACGGTCCATGTTCACATGAAAGGGCAGCCCATACAG
CAGCAGCAGAGCAGCTGCTGCTCCTGATAAGCTCAGCAAGGCTCCATCCATACACCTCAC
CTCATGATATCTGCTTGAGTGGCTGGAGGCTAGAAGATTCACCATGAAAGGCTGGGGAGG
GCAGTGAACTGGATATATATACTGAATACAGAATTTGTCTACATCAGAAATTGTGTTGCT
ACTTACTGTTTAATGTACCCGTCACAGTTGGAGCTTGTTATGGAATCTCATTAGTGTTAC
TTCGTCAGTGTTTTAGAAGCATTTGATGGATCTTAGATGACAAAAATTGTATGAAAATAT
GGTTAATTCAAGCTTGTCGGTCATCATCCTGTCATCTTTTAGAAAGGCCCATATATTGTT
GCTAATAATCTGGAGTTTGTCTTGAGTCATTACTTCGTAACAGAAATTGTATGAAAAATA
TGGTTAATTCAAGCTTATCAGTCATCGTCCTGCCATATTTCAGAAAGGCTCAAAAAAAAA
AAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_61636.2	1118	0.0	1 - 1012	99	1002 / 1012	CUST_41107_PI390587928	ABC02537 ABC15661 ABC47157
AK360609	987	0.0	22 - 987	99	965 / 966	CUST_41107_PI390587928	ABC02536 ABC02537 ABC15661 ABC47157
MLOC_61636.1	1198	4e-69	943 - 1091	99	147 / 149	CUST_41107_PI390587928	ABC02537 ABC15661 ABC47157
AK362005	3522	2e-72	22 - 170	100	149 / 149	CUST_35664_PI390587928 CUST_41107_PI390587928	ABC02537 ABC47157
AK252583.1	693	1e-113	22 - 244	100	223 / 223	None	ABC02537
MLOC_61636.3	335	4e-113	1 - 228	99	226 / 228	CUST_35664_PI390587928	ABC02537
MLOC_78975.4	836	6e-107	515 - 813	90	271 / 300	None	ABC02536 ABC02537
MLOC_78975.2	1130	2e-106	550 - 847	90	270 / 299	CUST_35660_PI390587928	ABC02536 ABC02537
MLOC_61636.4	245	2e-106	1 - 225	98	220 / 225	None	ABC02537
AK375257	1108	2e-96	274 - 777	79	402 / 506	None	ABC02537 ABC15661
MLOC_6695.1	1893	5e-88	1450 - 1839	82	319 / 390	CUST_9143_PI390587928	ABC02537 ABC10506 ABC15661