barSeed - Barley Seed Development Database

Probe ABC02536

Source Contig ABC02536

barSeed

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Affymetrix Source Sequence (1071 bp)

>ABC02536 1071
CTCCCCTCCCCACAACCCGCAACACAAACCCTAACCCTCCCATCTGACCCATGTACCCTC
TCCCCAATTGGGCCGCCGCCGCCCATCTACGGCGGCTAATCCCACCTCCTCGCCTTCATT
GATGACCACCTGCTCCCACGCGCCAGCTCCTTCCCCTCATCGCCTCGCTCCTCGCCTTCC
CCGCCGACCACCCGCTCCGCGACCACCTCGTCGCCACCGCCGCCTCTGGCCTCGCCTTCG
TGTTCTCCGTGCCGGTCTCCGACCACCTACAAGGTAGAGTCGTACCTCTCCCTATCTCCC
ATGGTGTCAGATCAAGCCGACGAGGTCAGCCCGCGGCCAGATCCGCCATGGCCACATCGG
GCCTGCCGGATCCGTGTCGTCGTCGAGCTGGATCCTCCTCGGAGGCCATGCGAGGACGAT
GGTCGTTGACGACGGCGTCGGCAGGTGCGTCGAGGTCCCTCCTCCATCTTCCTCCCCCTC
CCCTCCCCTCCACCGATCTGCACACCCCATCCACCGTCCTCGGATCCCCTCCAGCAGCCC
TCCCCCTCTTTCAACTCTGAATCCGCCGGAGCCCAGCCGACGCCCGCCATGAGCACCTCC
GAGTACGACTACCTCTTGAAGCTGCTCCTCATCGGCGACTCCTCCATCGGCAAGTCGTGC
CTCCTCCTCCGCTTCGCCGACAATTCGTACGGCGGCAACTACATCAACACCACCGGCGTT
GATTTCAAAATCCGGACCGTCGAGCTCGACGGCAAGTCGGTGAAGCTGCAGATTGTGAGT
TCCAGTTCACAGGAACTTTGCTAGTGCCAGTTCATTCGTAGTTATATGTGTGCATGGTCT
AGAAATGTTCCCGTTATTAGCTCGAGAACATGTGATGCCGGCCATATTGTAGGTTCTAAA
TATGTGTGAGTCTGACAGTGTATGTGTGTGTGGGTCTGGTTCTACATGTTTTACTTAAAA
GTGAGATTTTATTTTTCTTCATCTTTTAGGGGAGAAACTTTTGATCTGTTCAACGACTCT
CAAGATAGTATAAATAACATCAGAAATAAAAATTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_78975.2	1130	0.0	74 - 1128	99	1053 / 1055	CUST_35660_PI390587928	ABC02536 ABC02537
MLOC_78975.4	836	0.0	39 - 812	99	772 / 774	None	ABC02536 ABC02537
MLOC_78975.3	1019	0.0	74 - 752	99	677 / 679	None	ABC02536
MLOC_78975.1	1191	4e-178	853 - 1191	100	339 / 339	CUST_35660_PI390587928	ABC02536
AK360609	987	1e-107	30 - 339	90	280 / 312	CUST_41107_PI390587928	ABC02536 ABC02537 ABC15661 ABC47157