barSeed - Barley Seed Development Database

Probe ABC02519

Source Contig ABC02519

barSeed

Links

Affymetrix Source Sequence (1023 bp)

>ABC02519 1023
ACCACTACGACAGTAGCGTAAGCGTAACACCGAGTACGTACTGTGTGCTTTGTTGGCTCG
CACAATGAGATCGCTCGCGGTGGTGATGGCCGTGGTAACCACGGTGGCCATGGCCATCGG
CACGGCGCGCGGCAGCGTGTCCTCCATCATCTCGCGCGCACAGTTCGACCGCATGTTGCT
GCACCGCAACGACGGCGCCTGCCAGGCCAAGGGCTTCTACACCTACGACGCCTTCGTCGC
CGCCGCATCTGCCTTCCCGGGCTTCGGCAGCACCGGCAGCGCCGACGCCCAGAAGCGCGA
GGTGGCCGCCTTCCTGGCCCAGACCTCCCACGAGACCACCGGCGGATGGGCGACGGCACC
GGACGGGGCCTTCGCCTGGGGCTACTGCTTCAAGCAGGAACGCGGCGCCTCCTCCGACTA
CTGCACCCCGAGCGCACAGTGGCCGTGCGCCCCCGGGAAGCGCTACTACGGCCGCGGGCC
CATCCAGCTCTCCCACAACTACAACTATGGACCTGCCGGCCGGGCCATCGGGGTCGATCT
GCTGGCCAACCCGGACCTGGTGGCCACGGACGCCACTGTGGCGTTTAAGACGGCCATCTG
GTTCTGGATGACGGCGCAGCCGCCCAAGCCGTCGAGCCATGCTGTGATCGCCGGCCAGTG
GAGCCCGTCAGGGGCTGACCGGGCCGCAGGGCGGGTGCCCGGGTTTGGTGTGATCACCAA
CATCATCAATGGTGGGATCGAGTGTGGTCACGGACAGGACAGCCGTGTCGCCGATCGAAT
CGGGTTTTACAAGCGCTACTGTGACATCCTCGGCGTTGGCTACGGCAACAACCTCGACTG
CTACAGCCAGAGACCCTTCGCTTAATTAATTAGTTATGTATTAATCTTGGCCCTCCATAA
AATACAATAAGAGCATCATCTCCTATCTACATGCTGTAAGATGTAACTTTCGTTACCTTT
TATGGGGAACATAACTAAGGCATCTCGTATAGATGCTTAATTTGCTAAAAAAAAAAAAAA
AAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_6801.1	1331	284 - 1290	100	1007 / 1007	CUST_37872_PI390587928	ABC02517 ABC02518 ABC02519
AK376513	1152	288 - 1076	91	724 / 796	CUST_37871_PI390587928	ABC02517 ABC02518 ABC02519 ABC04174 ABC07001 ABC16814
MLOC_6800.1	749	1 - 582	89	522 / 588	CUST_37871_PI390587928	ABC02517 ABC02518 ABC02519 ABC04174