barSeed - Barley Seed Development Database

Probe ABC02407

Source Contig ABC02407

barSeed

Links

Affymetrix Source Sequence (1032 bp)

>ABC02407 1032
GATCCATTCCAAGTGAGCTAAGCAACAGCCTAAAGCGAGTCCGAGTGGTGATTCCAGTTC
GTGTTTGTTTGAGCTAGATCGTGAGACGAAGATGGCCTCCAACCAGAACCAGGGGAGCTA
CCACGCCGGCGAGACCAAGGCCCGCACCGAGGAGAAGACCGGGCAGATGATGGGCGCCAC
CAAGCAGAAGGCGGGGCAGACCACCGAGGCCACCAAGCAGAAGGCCGGCGAGACGGCCGA
GGCCACCAAGCAGAAGACCGGCGAGACGGCCGAGGCCGCCAAGCAGAAGGCCGCCGAGGC
CAAGGACAAGACGGCGCAGACGGCGCAGGCGGCCAAGGACAAGACGTACGAGACGGCGCA
GGCGGCCAAGGAGCGCGCCGCCCAGGGCAAGGACCAGACCGGCAGCGCCCTCGGCGAGAA
GACGGAGGCGGCCAAGCAGAAGGCCGCCGAGACGACGGAGGCGGCCAAGCAGAAGGCCGC
CGAGGCAACCGAGGCGGCCAAGCAGAAGGCGTCCGACACGGCGCAGTACACCAAGGAGTC
CGCGGTGGCCGGCAAGGACAAGACCGGCAGCGTCCTCCAGCAGGCCGGCGAGACGGTGGT
GAACGCCGTGGTGGGCGCCAAGGACGCCGTGGCAAACACGCTGGGCATGGGAGGGGACAA
CACCAGCGCCACCAAGGACGCCACCACCGGCGCCACCGTCAAGGACACCACCACCACCAC
CAGGAATCACTAGACGCATGCGTTCGCGCTTAATTTCCGTTCCTTTAGTCGTGTTTGGTC
GTTCGAGGGCCTTCTACATATTTCATATTTGTATGTTTCCACTCTTTCATGATTTCCGCT
CATTTAGTGTAAGTTTGCCTCCGATTTGATGTACTCGTCTCTGGTTCTGTAATGAGTTAT
AATCCATGGGCTTTGGTGTAAATGGATAACGAGGACACTCGAAGGCGGCAATAAAGTTGT
ATGTGATCGAATTTCTGTAAAAAAAAAAAAAAAAAGAAAACATATATTGTGTTTCAAAAA
AAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_72442.1	1126	0.0	13 - 991	100	979 / 979	CUST_12490_PI390587928 CUST_38151_PI390587928	ABC02405 ABC02406 ABC02407 ABC02408 ABC37877
MLOC_72442.2	1034	2e-105	458 - 901	82	395 / 479	CUST_12490_PI390587928	ABC02405 ABC02406 ABC02407 ABC02408 ABC37877
AK358283	2392	0.0	12 - 483	99	469 / 472	CUST_12490_PI390587928	ABC02406 ABC02407 ABC02736 ABC02737 ABC02738 ABC37622
MLOC_77777.3	1161	2e-90	343 - 598	90	232 / 257	CUST_20151_PI390587928	ABC02405 ABC02406 ABC02407 ABC02408 ABC31246
MLOC_77777.2	1095	5e-52	343 - 490	92	137 / 149	CUST_20151_PI390587928	ABC02405 ABC02406 ABC02407 ABC02408 ABC31246
MLOC_6950.1	1062	1e-102	252 - 736	81	402 / 496	CUST_38174_PI390587928	ABC02405 ABC02406 ABC02407 ABC02408 ABC31246
MLOC_6950.3	904	1e-102	183 - 667	81	402 / 496	None	ABC02405 ABC02406 ABC02407 ABC02408 ABC31246
MLOC_77777.4	254	7e-51	109 - 254	92	135 / 147	None	ABC02406 ABC02407