barSeed - Barley Seed Development Database

Probe ABC02226

Source Contig ABC02226

barSeed

Links

Affymetrix Source Sequence (1098 bp)

>ABC02226 1098
GGGACGTCAGTTCGTGAGGACCAGAGGATTCTTGCAAGTGGAGTGCATGTCGTTGTTGGT
ACTCCTGGTCGTGTGTTTGACATGCTCCGTAGGCAGTCTCTGCGCCCTGACAACATCAAG
ATGTTTGTCCTTGATGAAGCTGATGAGATGCTTTCCCGTGGATTCAAGGATCAGATTTAT
GACATCTTCCAGCTGCTCCCAGGGAAGATTCAAGTTGGTGTCTTCTCTGCTACCATGCCC
CCTGAAGCCCTTGAGATTACCCGCAAGTTCATGAACAAGCCTGTGAGGATCCTTGTCAAG
AGGGATGAGCTCACCCTTGAGGGTATCAAGCAGTTCTATGTCAATGTTGAGAAGGAAGAG
TGGAAGCTTGACACACTGTGTGACCTGTACGAGACTCTTGCCATCACCCAGAGTGTCATC
TTCGTGAATACCCGCCGCAAGGTGGACTGGCTCACCGACAAGATGAGGGGCAGGGACCAC
ACCGTCTCCGCTACTCATGGAGACATGGACCAGAACACTAGGGACATCATCATGAGGGAG
TTCAGATCAGGTTCTTCACGTGTGCTCATCACCACTGACCTGCTTGCTCGTGGTATTGAT
GTCCAGCAAGTGTCCCTGGTCATCAACTATGACCTCCCGACCCAGCCAGAGAACTACCTG
CATCGCATTGGTCGTAGTGGTCGGTTTGGAAGGAAGGGTGTGGCCATCAACTTTGTTACG
CTGCGGGCTGTGGAGAACATATGGTAAGGGGGGTGGGGGTCCTGACAGGGCTTTGTTTTT
GTTGAAATATCACCAAGTTTCTTGTCTGTGGGGGAAGGCGGGTTTAAGGGATAAATGGTC
TGCTGGGGTTCTACTTTAAAGTCGTTGTCGTGGACAATTTGGGATTTATTAAGCCATGTT
TTGGGAATTTTTGTAGTTGCTAGGCTGTGGTTCTATGTGCTGGGGAGGGAGGCGTCGCTG
CTCATGTTGCTGTTGCTGGAGTCCTCACTTTATTTGTTAAGACTATGTAATGACCGAATG
ATGTTATTTGTTTGTGTCATCCTTGACTCTTTACCTATCGCATGTAATCCTGCAATCGCT
GCTAGTAATGCTATCGTT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_69436.2	1815	0.0	1380 - 1756	100	377 / 377	CUST_25957_PI390587928 CUST_19606_PI390587928 CUST_19613_PI390587928 CUST_19611_PI390587928 CUST_19607_PI390587928	ABC02222 ABC02226 ABC48039
MLOC_69436.1	1607	2e-91	1405 - 1587	100	183 / 183	CUST_19606_PI390587928 CUST_25957_PI390587928 CUST_19613_PI390587928 CUST_19607_PI390587928 CUST_19611_PI390587928	ABC02222 ABC02226 ABC48039
MLOC_69436.3	2154	0.0	1314 - 2034	99	718 / 721	None	ABC02222 ABC02226
MLOC_69436.4	2507	0.0	1957 - 2333	100	377 / 377	CUST_19607_PI390587928 CUST_19611_PI390587928 CUST_19613_PI390587928 CUST_19606_PI390587928 CUST_25957_PI390587928	ABC02222 ABC02226 ABC48039
MLOC_57298.1	1865	0.0	882 - 1582	90	630 / 702	None	ABC02222 ABC02225 ABC02226
MLOC_57298.2	1839	0.0	769 - 1469	90	630 / 702	CUST_19608_PI390587928	ABC02222 ABC02225 ABC02226