barSeed - Barley Seed Development Database

Probe ABC02222

Source Contig ABC02222

barSeed

Links

Affymetrix Source Sequence (1658 bp)

>ABC02222 1658
CTCTTCCCACCGCAGGAAAGAGCTCCTCCCATCCCCTCCCCCCACCGCCTCCACCGACGC
ATCGATCGAATCCGGGACACGATCTCGGATTCGCTCGGCCAATCGACGCGCACCAGCCCC
CCGGATCGTCGTTCGTACTCCCCCACCGCGAGCGCTTCAGCCATGGCAGGAATGGCACCA
GAGGGTTCCCAGTTTGATGCTAAGCACTATGACAGTAAGATGACTGAGTTACTGAACCAA
GGTGACACTGAGGAGTTTTTCACCTCATATGATGAGGTGCATGAAAGTTTTGATGACATG
GGCCTCCAAGAGAACCTTCTTAGAGGCATCTATGCTTATGGTTTTGAGAAGCCATCAGCC
ATTCAGCAAAGAGGAATTGTTCCCTTCTGCAAGGGTCTTGATGTGATTCAACAAGCTCAG
TCTGGTACAGGAAAAACTGCCACCTTCTGTTCTGGAATCTTGCAGCAGCTTGACTATGGA
TTGGTTGAGTGCCAGGCATTGGTCCTTGCTCCGACCCGTGAGCTTGCACAGCAGATTGAG
AAGGTCATGCGTGCTCTTGGTGACTACTTAGGCGTCAAGGTGCATGCATGTGTTGGTGGA
ACTTCTGTCCGTGAGGATCAGAGGATTCTTGCCAGTGGTGTGCATGTTGTTGTCGGCACA
CCTGGTCGTGTGTTCGATATGTTGCGCAGGCAATCCCTCCGCCCAGATAACATCAAGATG
TTTGTGTTGGATGAAGCTGATGAGATGCTATCACGTGGTTTCAAGGATCAGATCTATGAT
ATCTTCCAGCTTCTTCCATCAAAGATTCAGGTTGGGGTGTTCTCTGCTACCATGCCTCCT
GAGGCTCTTGAGATAACCCGCAAGTTCATGAACAAGCCCGTGAGGATTCTTGTCAAGAGA
GATGAGCTTACCCTTGAGGGTATCAAGCAATTCTATGTCAATGTTGAGAAGGAAGAGTGG
AAGCTGGACACACTCTGTGACCTGTACGAGACCTTGGCAATTACCCAGAGTGTCATCTTT
GTGAACACCCGCCGCAAGGTGGACTGGCTCACCGACAAGATGAGGGGAAGGGACCACACT
GTCTCTGCAACACACGGAGACATGGACCAGAACACTAGGGACATCATCATGAGGGAGTTC
AGATCTGGCTCTTCTCGTGTGCTCATCACCACCGACCTGCTGGCCCGTGGTATTGATGTG
CAGCAAGTCTCCCTTGTCATCAACTATGACCTGCCGACCCAGCCTGAGAACTACCTCCAT
CGCATTGGTCGTAGTGGTCGGTTCGGGAGGAAGGGAGTTGCCATCAACTTCGTCACCCGT
GAAGATGAGAGGATGCTGTTCGACATCCAGAAGTTCTACAACGTGGTCATTGAGGAGCTC
CCGGCCAATGTCGCCGACCTTCTCTAGATTATTATCATAGGAATGCAGTAAGGTGCTCGA
TAAAGTTCGTTTTTGTTGAATATCTCCCAACTCTCAGTTTTGGAGTGGTAAGGTCTGGTT
CTGTTTGAATCGCGGTTAAGGATCGATTTTTTTTTTTCTTGTTATGCAATGTCCGGAAAT
TTTTGTAGTGCGTAGGCTGTGCCAACTCCCGGGCTAGCTGGGATAGAGTGACACTAATGG
AGTATTTTACTTCTCGTTGTGAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_57298.2	1839	0.0	161 - 1802	99	1640 / 1643	CUST_19608_PI390587928	ABC02222 ABC02225 ABC02226
MLOC_57298.1	1865	5e-114	181 - 413	99	231 / 234	None	ABC02222 ABC02225 ABC02226
MLOC_69436.1	1607	0.0	123 - 1376	89	1112 / 1256	CUST_19606_PI390587928 CUST_25957_PI390587928 CUST_19611_PI390587928 CUST_19607_PI390587928 CUST_19613_PI390587928	ABC02222 ABC02226 ABC48039
MLOC_69436.3	2154	0.0	874 - 2119	89	1105 / 1247	None	ABC02222 ABC02226
MLOC_69436.4	2507	0.0	704 - 1949	89	1105 / 1247	CUST_25957_PI390587928 CUST_19606_PI390587928 CUST_19611_PI390587928 CUST_19613_PI390587928 CUST_19607_PI390587928	ABC02222 ABC02226 ABC48039
MLOC_69436.2	1815	0.0	119 - 1372	88	1111 / 1256	CUST_19606_PI390587928 CUST_25957_PI390587928 CUST_19611_PI390587928 CUST_19607_PI390587928 CUST_19613_PI390587928	ABC02222 ABC02226 ABC48039