barSeed - Barley Seed Development Database

Probe ABC01910

Source Contig ABC01910

barSeed

Links

Affymetrix Source Sequence (751 bp)

>ABC01910 751
CAACCGCAGCCGCCGCCATGTCGAAGCGAGGGAGGGGAGGCTCCGCGGGGAACAAGTTCC
GGATGTCGCTGGGTCTGCCGGTGGCGGCGACGGTGAACTGCGCCGACAACACGGGCGCTA
AGAACCTCTACATCATCTCCGTCAAGGGTATCAAGGGCCGCCTCAACCGTCTCCCGTCGG
CCTGCGTCGGCGACATGGTCATGGCCACCGTCAAGAAGGGGAAGCCCGATCTGCGAAAGA
AGGTCATGCCCGCAGTCATCATCCGCCAGCGCAAGCCGTGGCGACGCAAGGACGGTGTCT
TCATGTACTTCGAAGACAATGCTGGAGTGATCGTGAACCCTAAGGGTGAGATGAAAGGAT
CTGCCATCACCGGACCTGTGGGCAAGGAGTGTGCTGACCTTTGGCCCAGGATCGCCAGCA
ACGCCAATGCCATCGTTTGAGAGCTTGTTTCAAGTTGTGAGTCTGCCTATATAATGCCAG
TGTGGGTTGCAACTGTGTTGCCTGGGAAATAGTGGAACCTTTGCGTTGCTCCATTTTGTC
TGGCATCTCAGTTTGTTAGTGAACAGAAGCCTGCCTGTCTACTACTTAGTTTGACATCTG
TGTTGCTGAACCTGTGTTAACATTATCTGCAATTACTCAATTGCTGTGTGGTTCAAATTG
TCAAAAAAAAAAAAAAAAATTCTTTGTCACGATTGCCCGTATGGCATTAGGAATGTTTAA
TCTTCCATTATCTTAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
AK252978.1	765	0.0	11 - 734	98	720 / 735	None	ABC01908 ABC01909 ABC01910 ABC30016
MLOC_54896.2	818	0.0	1 - 564	99	561 / 564	None	ABC01908 ABC01909 ABC01910 ABC30016
MLOC_54896.1	3348	2e-144	2945 - 3231	99	284 / 287	None	ABC01908 ABC01909 ABC01910 ABC30016
MLOC_59320.1	747	9e-163	132 - 572	90	398 / 441	CUST_22124_PI390587928 CUST_7360_PI390587928	ABC01908 ABC01909 ABC01910
AK252507.1	604	4e-161	51 - 491	90	397 / 441	None	ABC01908 ABC01909 ABC01910
MLOC_36471.1	1286	6e-120	470 - 871	86	346 / 402	CUST_22105_PI390587928	ABC01908 ABC01909 ABC01910 ABC34657 ABC35120
AK367019	767	2e-69	85 - 431	81	282 / 350	None	ABC01910