barSeed - Barley Seed Development Database

Probe ABC01909

Source Contig ABC01909

barSeed

Links

Affymetrix Source Sequence (872 bp)

>ABC01909 872
CCGCCGCCGGGTACCGCCCCCTCTTTCCAAGATGTCGAAGCGAGGGCGTGGAGGTTCCGC
TGGAAACAAGTTCCGGATGTCGCTGGGTCTGCCGGTGGCAGCCACTGTGAACTGTGCTGA
CAACACTGGTGCCAAGAACCTCTACATCATCTCCGTGAAGGGAATCAAGGGTCGTCTGAA
CAGGCTTCCTTCTGCCTGTGTTGGTGACATGGTTATGGCCACTGTCAAGAAGGGAAAGCC
TGACCTGAGGAAGAAGGTCATGCCGGCTGTCATCGTGAGGCAGCGCAAGCCATGGCGCCG
AAAGGACGGAGTCTTCATGTACTTTGAAGACAATGCTGGAGTCATTGTGAACCCAAAGGG
AGAGATGAAAGGTTCTGCCATCACCGGACCCATCGGGAAGGAGTGTGCCGACCTGTGGCC
CAGGATTGCCAGCGCAGCAAACGCCATTGTCTGATCACTGGAGCAGCTAGATGATCAAAG
CTTTGATAGCATGTCCCTCTTTTCTTCTAGTTTATTATTACTTGTGGCACTTGAGGATGA
GTTTCCTGGATTATGTAATGCTGCTGGATTATGGCCTGCTAGCTTTCGTAAGATTTTGCA
CTGTGGTTTTGGCTACTGAGATTTGGCGTGTTCGAACCTGAAAGAGCTTTTGATCGAAAT
TTATCTCTGTTGTGGCCACCAAAAAAAAAAAAAAAATGGCTTGGATGTTAATTAGTCTAT
TGATAAGTGTGCTAGCTTTTGGTGGCATGTGTCCAAAAATTTCTAAGCATATTGAGCTGC
AAATATGCAGATGGCATGAAAAAAAAAGAGCACAGTTCTGAAGAATGTTTTGTCCTTTCA
ATGTAGCAATAATAATTTTCAGATTTTTTGTT

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_36471.1	1286	0.0	439 - 1286	98	834 / 848	CUST_22105_PI390587928	ABC01908 ABC01909 ABC01910 ABC34657 ABC35120
AK252507.1	604	1e-136	58 - 480	87	370 / 423	None	ABC01908 ABC01909 ABC01910
MLOC_59320.1	747	1e-136	143 - 565	87	370 / 423	CUST_22124_PI390587928 CUST_7360_PI390587928	ABC01908 ABC01909 ABC01910
AK252978.1	765	1e-121	28 - 429	86	347 / 402	None	ABC01908 ABC01909 ABC01910 ABC30016
MLOC_54896.2	818	9e-114	174 - 564	86	335 / 391	None	ABC01908 ABC01909 ABC01910 ABC30016
MLOC_54896.1	3348	6e-76	2945 - 3231	85	243 / 287	None	ABC01908 ABC01909 ABC01910 ABC30016