barSeed - Barley Seed Development Database

Probe ABC01815

Source Contig ABC01815

barSeed

Links

Affymetrix Source Sequence (1146 bp)

>ABC01815 1146
CACGTTCCTCTCTCCTTTTGTAGCAGTGGGTGAGTTTTGGAGCACACACTTTCATCTCAG
TCTCTACCACACACACCGCGTCTGCCTCATCTCTCGGAGCAGCAGGAGGAGGAGCTTGCA
GGAACAATGGCGGCCCAGGGTCTTCTCTCTGGGAGGCAGCTGCTGGGTAGGCCTCTGCAG
TCTTCCTTCTCCAGGTCGTCTTCCTCCCGGAAGTCCCCCTTCGTCGTCAGGGCATCGTCC
AGCCCCCCTGCCAAGCAAAATGACAACAGGCAGCTGTGGTTCGCGTCCAAGCAGTCCCTC
ACCTACCTCGACGGCACGCTGCCTGGTGACTTTGGCTTCGACCCCTTGGGGCTGTCCGAC
CCGGAGGGCACCGGCGGGTTCATCGAGCCCAGGTGGCTGGCCTACGGCGAGATCTTCAAC
GGCCGGACGGCGATGATGGGGGTGGTGGGCATGATCGCCCCGGAGGCCCTGGGCAAGGTG
GGTCTGGTGCCCCCGGAGACGGCGATCCCGTGGTTCCAGGCGGGCGCCATCCCGCCGGCA
GGCACCTACCAGTACTGGGCCGACCCCTACACGCTCTTCGTGTTCGAGATGGCACTGATC
GGCTTCGCAGAGCACCGGCGGCTCCAGGACTGGTACAACCCGGGTTCCATGGGGAAGCAG
TACTTCCTGGGTCTCGAGAAGTACCTCGGCGGCTCCGGCGACCCCGCCTACCCCGGCGGG
CCCATCTTCAACCCACTCGGGTTCGGCACCAAGAGCGAGAAGGAGATGAAGGAGCTCAAG
CTCAAGGAGATCAAGAACGGCCGTCTCGCCATGCTCGCCTTCCTCGGCATGTCGCTGCAG
GCCATCTTCACCGGCGTCGGGCCCTTCCAGAACCTCCTCGACCACCTCTCCGACCCCGTC
AACAACAACATCCTCACCAGCCTCAAGTTCCACTAGGCGAAATCCGAGCATCGTCGTCCT
GTGCATGGTACCCGTCTGTCGTCGTGGGAAACGTGAGCGCGCGAGCGGTATATATGCGAG
GGTGGGTGTAAAATGTAAATTTGTACGCGTGCTGCGTGCATGCTTGTAATATTTATATCG
TGCTATGAAAATTAGTGCATTGCATCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAANAA
AAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_49483.1	1674	0.0	1 - 1102	100	1102 / 1102	None	ABC01815
AK251101.1	1784	0.0	733 - 1782	99	1049 / 1050	CUST_10813_PI390587928	ABC01815 ABC03239 ABC03243
MLOC_49483.2	1531	0.0	1 - 1027	100	1027 / 1027	None	ABC01815
MLOC_49483.3	266	1e-123	1 - 241	100	241 / 241	None	ABC01815