barSeed - Barley Seed Development Database

Probe ABC01648

Source Contig ABC01648

barSeed

Links

Affymetrix Source Sequence (1421 bp)

>ABC01648 1421
GGCTGCAGGACGCCCCTCCTCCTCCCCCCGCATTTCCAAGAGAGCTAGCCACCATTTGCC
TCCCACAAGAACACCTCTCCCTCCTCCTCCGCCTGCTCTCCCCCTCCCTCTCCGGCTCAG
GCTCCGTCTCCGGGGAAGAAGAAGAAGAAGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAG
AAGAAGGAGGAGGAGGAGGGGTAGCTCGCCATGTCTCGGCTCGCCGACCTTCTCAGCCTC
GACCTGTCCGGCTGCACCGGCAAGATCATCGCCGAGTACATATGGGTCGGCGGCACCGGG
ATGGACGTCAGGAGCAAAGCCAGGACGCTTCCCGGACCCGTGGACGACCCCAGCAAGCTT
CCAAAGTGGAATTTCGACGGCTCCAGCACCGGCCAAGCCACGGGCGACGACAGCGAAGTC
ATCCTCCGACCCCAAGCCATCTTCAGGGACCCGTTCAGGAAAGGGAACAACATCCTGGTC
ATCTGTGACTGCTATGCGCCTACCGGAGAGCCGATTCCGAGCAACAAGCGGTACAACGCG
GCGAGGATATTCGGCCATCCTGATGTCAAGTCTGAAGAACCATGGTATGGGATTGAGCAG
GAGTACACCCTTCTCCAGAAGGACACCAACTGGCCCATTGGCTGGCCACTAGGGGGTTAC
CCTGGCCCTCAGGGGCCTTACTACTGCGCCGCGGGTGCGGAGAAATCTTACGGGCGCGAC
ATCGTCGACGCCCACTACAAGGCCTGCCTCTACGCCGGCATCAACATCGGCGGCATCAAT
GCAGAAGTCATGCCAGGGCAGTGGGAGTTCCAAGTCGGCCCTTCCGTCGGCATCTCCGCC
GGCGACGAGCTCTGGGCGGCTCGCTACATTCTCGAGAGGATCACTGAGATCGCCGGCGTC
GTCGTCTCCTTCGACCCCAAACCGATCCCGGGAGAGTGGAACGGTGCCGGTGCCCACACA
AACTACAGCACCAAGTCGATGAGGAGCGAGGGCGGGTACGAGGTGATCAAGAGGGCGATC
AAGAAGCTCGAGGCGCGGCACACGGAGCACATAGCCGCCTACGGGGAAGGCAACGAGCGC
CGGCTCACCGGCCGCCACGAGACCGCCGACATCAACACCTTCGTATGGGGCGTGGCAAAC
CGCGGCGCGTCGGTGCGGGTGGGGCGCGACACCGAGAAGGAAGGCAGGGGCTACTTCGAG
GACCGGAGGCCGGCGTCCAACATGGATCCCTACGTCGTCACCTCCATGATCGCCGAGACC
ACCATCCTCTGGAAGGCCGGTCTCTCCAATGGCAAGTAGAGTTACCTGTGATGGTGTTAT
GTGTAAGCGCCCCGTGGTTGTGTGTGCGTGATCTGCATTGCAGTGATGAGACTGGCAAGG
TTTGAATAAAAATGATGAAGCAATAAAAAAAAAAAAAAAAA

Probe Sequence's BLAST hits in Barley MLOC transcripts

Hit	Hit Length	E-value	Position on Hit	% Identity	Match	Agilent Probes on MLOCs	Affymetrix Probes on MLOCs
MLOC_62034.1	1469	0.0	72 - 1467	98	1373 / 1396	None	ABC01646 ABC01648
MLOC_62034.2	1514	0.0	20 - 496	100	477 / 477	None	ABC01646 ABC01648
MLOC_62034.3	1586	0.0	1 - 443	100	443 / 443	None	ABC01646 ABC01648
MLOC_11890.6	1495	0.0	68 - 1136	81	871 / 1073	CUST_5024_PI390587928 CUST_5021_PI390587928	ABC01646 ABC01648 ABC37056
MLOC_11890.5	1266	0.0	29 - 1017	81	805 / 993	CUST_5024_PI390587928	ABC01646 ABC01648 ABC37056
MLOC_11890.1	2305	0.0	636 - 1624	81	805 / 993	CUST_5024_PI390587928 CUST_5021_PI390587928	ABC01646 ABC01648 ABC37056
MLOC_11890.3	2152	0.0	902 - 1832	81	761 / 935	CUST_5024_PI390587928	ABC01646 ABC01648 ABC37056
MLOC_11890.7	1635	0.0	152 - 1084	81	762 / 937	CUST_5024_PI390587928 CUST_5021_PI390587928	ABC01646 ABC01648 ABC37056
MLOC_15134.1	1104	0.0	166 - 844	85	581 / 682	None	ABC01646 ABC01648
MLOC_11890.8	1368	8e-166	106 - 797	82	567 / 692	CUST_5024_PI390587928 CUST_5021_PI390587928	ABC01648 ABC37056